RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 EXOC2Q96KP1 924 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 FEM1AQ9BSK4 669 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 KCNK4Q9NYG8 393 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 CLEC4EQ9ULY5 219 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 NOTCH4Q99466 2003 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 TYW5A2RUC4 315 aaKnown RBP17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 GOLGA8TH3BQL2 631 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 CD160O95971 181 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 CDH18Q13634 790 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 HSP90AA5PQ58FG0 334 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 PKN3Q6P5Z2 889 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 RTL10Q7L3V2 364 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 RNF135Q8IUD6 432 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 PHC3Q8NDX5 983 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 NSMCE3Q96MG7 304 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 PSKH2Q96QS6 385 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 AGAP2Q99490 1192 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 SEPT3Q9UH03 358 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 ARHGAP26Q9UNA1 814 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 WASF2Q9Y6W5 498 aa17.2■□□□□ 0.34
PCDHB17P-201ENST00000539533 MYLKQ15746 1914 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 MIA3Q5JRA6 1907 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 CCDC195A0A1B0GUA6 201 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 CAPN14A8MX76 684 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 B2RBV5 119 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 MAGEC1O60732 1142 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 CSKP41240 450 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 CYTH1Q15438 398 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 LGSNQ5TDP6 509 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 POTEHQ6S545 545 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 PACS1Q6VY07 963 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 IFT43Q96FT9 208 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 FAM161BQ96MY7 647 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 CINPQ9BW66 212 aaPredicted RBP17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 ARNT2Q9HBZ2 717 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 VPS28Q9UK41 221 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 ZNF510Q9Y2H8 683 aa17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.19■□□□□ 0.34
PCDHB17P-201ENST00000539533 KRT38O76015 456 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 HOXA9P31269 272 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 HSF5Q4G112 596 aaPredicted RBP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 TREML1Q86YW5 311 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 TMPRSS6Q8IU80 811 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 KBTBD2Q8IY47 623 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 CPXM2Q8N436 756 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 DRAXINQ8NBI3 349 aaPredicted RBP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 USP13Q92995 863 aaPredicted RBP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 C7orf26Q96N11 449 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 ZNF184Q99676 751 aaPredicted RBP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 MGME1Q9BQP7 344 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 MECRQ9BV79 373 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 TASP1Q9H6P5 420 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 C20orf96Q9NUD7 363 aaPredicted RBP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 SLC2A6Q9UGQ3 507 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 OR51B4Q9Y5P0 310 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 XYLBO75191 536 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 RFPL1O75677 317 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 ZMPSTE24O75844 475 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 ENO1P06733 434 aaKnown RBP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 HNRNPA1P09651 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 PFKLP17858 780 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 SCNN1BP51168 640 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 BST1Q10588 318 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 SIRPB2Q5JXA9 342 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 ESRP1Q6NXG1 681 aaKnown RBP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 TRIM42Q8IWZ5 723 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 BBS5Q8N3I7 341 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 FBXO27Q8NI29 283 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 ZNF707Q96C28 371 aaPredicted RBP17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 ALG14Q96F25 216 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 ZSWIM3Q96MP5 696 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 PRKD2Q9BZL6 878 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 PLLPQ9Y342 182 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 TCAF1Q9Y4C2 921 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 C5orf42Q9H799 3197 aa17.18■□□□□ 0.34
PCDHB17P-201ENST00000539533 A0A1B0GVG6 124 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 LOC285095A0A1B0GVY8 99 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 F8W8V4 182 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 TMPRSS15P98073 1019 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 MSLNQ13421 630 aaPredicted RBP17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 SEPT6Q14141 434 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 CBX2Q14781 532 aaPredicted RBP17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 TEDDM1Q5T9Z0 273 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 FOXB2Q5VYV0 432 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 ALG1LQ6GMV1 187 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 ZNF783Q6ZMS7 281 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 KCNMB4Q86W47 210 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 APCDD1Q8J025 514 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 C12orf76Q8N812 135 aaPredicted RBP17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 RBM15BQ8NDT2 890 aaKnown RBP17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 PPHLN1Q8NEY8 458 aaKnown RBP17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 SAMD11Q96NU1 681 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 TRAPPC9Q96Q05 1148 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 ANGPTL2Q9UKU9 493 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 REV3LO60673 3130 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 PRAMEF12O95522 483 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 FGF19O95750 216 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 ATXN1LP0C7T5 689 aaKnown RBP17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 SERPINB9P50453 376 aa17.17■□□□□ 0.34
PCDHB17P-201ENST00000539533 SERPINH1P50454 418 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms