RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 CES3Q6UWW8 571 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 PARS2Q7L3T8 475 aaKnown RBP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 TMEM135Q86UB9 458 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 CCNJLQ8IV13 435 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 PALM2Q8IXS6 379 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 HCAR2Q8TDS4 363 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 SHDQ96IW2 340 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 NECAB3Q96P71 396 aaPredicted RBP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MCCC1Q96RQ3 725 aaPredicted RBP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MRM3Q9HC36 420 aaKnown RBP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 LTB4R2Q9NPC1 389 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 PHTF1Q9UMS5 762 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 PPIL1Q9Y3C6 166 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MTF2Q9Y483 593 aaPredicted RBP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 KANSL1LA0AUZ9 987 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MAGEB16A2A368 324 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 CCDC78A2IDD5 438 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MROH6A6NGR9 719 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 C16orf96A6NNT2 1141 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 TSHRP16473 764 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 COL9A1P20849 921 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 ABL2P42684 1182 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 PSMD8P48556 350 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 COPAP53621 1224 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 SLC29A2Q14542 456 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 STARD3Q14849 445 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 UGP2Q16851 508 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 HSF5Q4G112 596 aaPredicted RBP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MDGA1Q8NFP4 955 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 BRSK1Q8TDC3 778 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 ARRDC3Q96B67 414 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MFSD3Q96ES6 412 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 FCRL3Q96P31 734 aaPredicted RBP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 FUT8Q9BYC5 575 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 FOXQ1Q9C009 403 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 VPS37BQ9H9H4 285 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MAGEE1Q9HCI5 957 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 MRPS17Q9Y2R5 130 aaKnown RBP11.47□□□□□ -0.57
FAM60A-206ENST00000539409 ARL5AQ9Y689 179 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 RPS6KL1Q9Y6S9 549 aa11.47□□□□□ -0.57
FAM60A-206ENST00000539409 A0A0U1RQS6 177 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 ZCWPW2A0A1B0GU75 182 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 NPIPB15A6NHN6 443 aaPredicted RBP11.46□□□□□ -0.57
FAM60A-206ENST00000539409 UPK3BL1B0FP48 263 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 UPK3BL2E5RIL1 263 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 C1QTNF3-AMACRE9PGA6 284 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 USP1O94782 785 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 POLBP06746 335 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 ABHD2P08910 425 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 NMBRP28336 390 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 HNF1BP35680 557 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 POLR2LP62875 67 aaKnown RBP11.46□□□□□ -0.57
FAM60A-206ENST00000539409 SATB1Q01826 763 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 FZD5Q13467 585 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 ANKRD20A4Q4UJ75 823 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 C3orf62Q6ZUJ4 267 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 USP45Q70EL2 814 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 GLT6D1Q7Z4J2 308 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 CACUL1Q86Y37 369 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 OR2T3Q8NH03 318 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 ZNF669Q96BR6 464 aaPredicted RBP11.46□□□□□ -0.57
FAM60A-206ENST00000539409 SCRN2Q96FV2 425 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 LYSMD1Q96S90 227 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 MKRN2Q9H000 416 aaKnown RBP11.46□□□□□ -0.57
FAM60A-206ENST00000539409 TREX1Q9NSU2 369 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 MMP17Q9ULZ9 603 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 ZNF711Q9Y462 761 aa11.46□□□□□ -0.57
FAM60A-206ENST00000539409 SCN8AQ9UQD0 1980 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 TCRBV9S1A1TA0A576 114 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 SPAG6O75602 509 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 NUDT17P0C025 328 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 TIMP2P16035 220 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 LRRC32Q14392 662 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 UBXN2BQ14CS0 331 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 TAF1AQ15573 450 aaPredicted RBP11.46□□□□□ -0.58
FAM60A-206ENST00000539409 CST6Q15828 149 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 CDKN3Q16667 212 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 SPANXN3Q5MJ09 141 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 EOGTQ5NDL2 527 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 TSTD2Q5T7W7 516 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 HDXQ7Z353 690 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 LYSMD3Q7Z3D4 306 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 SYNPOQ8N3V7 929 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 TTC30BQ8N4P2 665 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 UHMK1Q8TAS1 419 aaKnown RBP11.46□□□□□ -0.58
FAM60A-206ENST00000539409 GSDMBQ8TAX9 411 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 PPP1R16AQ96I34 528 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 FBRSQ9HAH7 460 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 POLR3BQ9NW08 1133 aaPredicted RBP11.46□□□□□ -0.58
FAM60A-206ENST00000539409 HACD3Q9P035 362 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 SLC2A6Q9UGQ3 507 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 KCTD3Q9Y597 815 aa11.46□□□□□ -0.58
FAM60A-206ENST00000539409 PAPSS2O95340 614 aaPredicted RBP11.45□□□□□ -0.58
FAM60A-206ENST00000539409 CRTAMO95727 393 aa11.45□□□□□ -0.58
FAM60A-206ENST00000539409 C1QAP02745 245 aa11.45□□□□□ -0.58
FAM60A-206ENST00000539409 SHBGP04278 402 aa11.45□□□□□ -0.58
FAM60A-206ENST00000539409 GSTA2P09210 222 aa11.45□□□□□ -0.58
FAM60A-206ENST00000539409 LHCGRP22888 699 aa11.45□□□□□ -0.58
FAM60A-206ENST00000539409 ZNF140P52738 457 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms