RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ZFYVE27	Q5T4F4	411 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ARMC12	Q5T9G4	340 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	MACC1	Q6ZN28	852 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CPNE8	Q86YQ8	564 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CCDC13	Q8IYE1	715 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	KATNAL2	Q8IYT4	538 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	RCOR2	Q8IZ40	523 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	GALNT15	Q8N3T1	639 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	NETO2	Q8NC67	525 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	OR4C6	Q8NH72	309 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TPCN2	Q8NHX9	752 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	OLFM3	Q96PB7	478 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	FZD3	Q9NPG1	666 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	EVA1B	Q9NVM1	165 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	NLGN3	Q9NZ94	848 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	NCKIPSD	Q9NZQ3	722 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CA5B	Q9Y2D0	317 aa		12.37	□□□□□ -0.43
CLTCL1-205	ENST00000538828	MAP1B	P46821	2468 aa	Known RBP	12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ENC1	O14682	589 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	MTSS1	O43312	755 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ZNF189	O75820	626 aa	Predicted RBP	12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CP	P00450	1065 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ELFN1	P0C7U0	828 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ZNF30	P17039	623 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TGM2	P21980	687 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ACP1	P24666	158 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	HTR1B	P28222	390 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	VIPR1	P32241	457 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	GJC1	P36383	396 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CDKN2B	P42772	138 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	THOP1	P52888	689 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	GBE1	Q04446	702 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	FOXC1	Q12948	553 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	BNIP3	Q12983	259 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PDE1C	Q14123	709 aa	Predicted RBP	12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PPP2R5E	Q16537	467 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	WSCD2	Q2TBF2	565 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PROX2	Q3B8N5	592 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TFDP3	Q5H9I0	405 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ESRP1	Q6NXG1	681 aa	Known RBP	12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	USP45	Q70EL2	814 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TMPRSS7	Q7RTY8	843 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SLCO6A1	Q86UG4	719 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	GATAD2A	Q86YP4	633 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SLC25A45	Q8N413	288 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	EXD1	Q8NHP7	514 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PIH1D2	Q8WWB5	315 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	RBM41	Q96IZ5	413 aa	Known RBP	12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	NSMCE3	Q96MG7	304 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	LYSMD1	Q96S90	227 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SEMA3C	Q99985	751 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SCNM1	Q9BWG6	230 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	NT5M	Q9NPB1	228 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	RBM22	Q9NW64	420 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PCDHGC4	Q9Y5F7	938 aa		12.36	□□□□□ -0.43
CLTCL1-205	ENST00000538828	GOLGA6L6	A8MZA4	724 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PDE2A	O00408	941 aa	Predicted RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TNFRSF10C	O14798	259 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	LZTS3	O60299	673 aa	Predicted RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	NEBL	O76041	1014 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	RECQL5	O94762	991 aa	Predicted RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	HEXIM1	O94992	359 aa	Known RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	KRT1	P04264	644 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PYGL	P06737	847 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CKMT2	P17540	419 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	KEL	P23276	732 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PTPN7	P35236	360 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	DUSP3	P51452	185 aa	Predicted RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	VAV2	P52735	878 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	KIAA1024L	P59773	190 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	DPT	Q07507	201 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TRAF2	Q12933	501 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	NFATC4	Q14934	902 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	IRF4	Q15306	451 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SMAD1	Q15797	465 aa	Known RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PRAMEF14	Q5SWL7	426 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	LVRN	Q6Q4G3	990 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TMPRSS12	Q86WS5	348 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CCNY	Q8ND76	341 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ARRDC2	Q8TBH0	407 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CNDP2	Q96KP4	475 aa	Known RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	COQ10A	Q96MF6	247 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	VAT1	Q99536	393 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	BAG1	Q99933	345 aa	Predicted RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	MYOC	Q99972	504 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	WRAP53	Q9BUR4	548 aa	Known RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	MBNL1	Q9NR56	388 aa	Known RBP	12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SPAST	Q9UBP0	616 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	B4GALT6	Q9UBX8	382 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SALL4	Q9UJQ4	1053 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	RAI2	Q9Y5P3	530 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	DGKB	Q9Y6T7	804 aa		12.35	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PTPRB	P23467	1997 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828		A0A0J9YYE9	177 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CCDC66	A2RUB6	948 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SOWAHD	A6NJG2	315 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	HACD1	B0YJ81	288 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TRBC1	P01850	177 aa		12.34	□□□□□ -0.43

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