RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 EXOC8Q8IYI6 725 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 BPIFB6Q8NFQ5 453 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 CGREF1Q99674 301 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 APOL2Q9BQE5 337 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 FAM95CA0A1B0GW59 222 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 NEMP2A6NFY4 417 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 H0YAE9 185 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 SPTLC1O15269 473 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 KCNH1O95259 989 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 SNAP29O95721 258 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 MYL3P08590 195 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 ALOX5P09917 674 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 TPH1P17752 444 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 RFC2P35250 354 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 OPRL1P41146 370 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 CADM3Q8N126 398 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 MAGEE2Q8TD90 523 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 DCPSQ96C86 337 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 SH3YL1Q96HL8 342 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 BEGAINQ9BUH8 593 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 GBA3Q9H227 469 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 ZBTB24O43167 697 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 EIF2S1P05198 315 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 GFAPP14136 432 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 GMPSP49915 693 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 SNX17Q15036 470 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 GTF2IRD2BQ6EKJ0 949 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 XAF1Q6GPH4 301 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 GTF2IRD2Q86UP8 949 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 NT5DC4Q86YG4 428 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 CNTN4Q8IWV2 1026 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 MINDY1Q8N5J2 469 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 HEXDCQ8WVB3 486 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 CCDC126Q96EE4 140 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 LRCH3Q96II8 777 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 MAGED4Q96JG8 741 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 CSF3RQ99062 836 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 KIFC1Q9BW19 673 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 MINDY3Q9H8M7 445 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 HMG20AQ9NP66 347 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 INTS10Q9NVR2 710 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 GPRC5DQ9NZD1 345 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 MAP10Q9P2G4 905 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 VWA7Q9Y334 891 aa18.67■□□□□ 0.58
SFSWAP-207ENST00000538548 ARPC2O15144 300 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 LCP1P13796 627 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 YWHAQP27348 245 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 TNFAIP2Q03169 654 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 SLC10A6Q3KNW5 377 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 LARP4Q71RC2 724 aaKnown RBP eCLIP18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 MFSD6LQ8IWD5 586 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 TTC30BQ8N4P2 665 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 LEMD2Q8NC56 503 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.66■□□□□ 0.582e-7■■■■■ 62.8
SFSWAP-207ENST00000538548 CPB2Q96IY4 423 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 MRPL45Q9BRJ2 306 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 SOX17Q9H6I2 414 aaPredicted RBP18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 DPP3Q9NY33 737 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 NDUFAF1Q9Y375 327 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 ZNF638Q14966 1978 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 A0A087X1B8 175 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 GJB1P08034 283 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 EEF1DP29692 281 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 CD68P34810 354 aaPredicted RBP18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 HPCAL1P37235 193 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 MATKP42679 507 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 OCA2Q04671 838 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 GALNT1Q10472 559 aaPredicted RBP18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 CDH17Q12864 832 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 TMEM132BQ14DG7 1078 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 MICALL2Q8IY33 904 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 SEPT1Q8WYJ6 367 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 TEX13BQ9BXU2 312 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 WDR12Q9GZL7 423 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 LHPPQ9H008 270 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 IL1RL2Q9HB29 575 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 MAGEE1Q9HCI5 957 aa18.66■□□□□ 0.58
SFSWAP-207ENST00000538548 ZBTB42B2RXF5 422 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 AP3B1O00203 1094 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 DCLK1O15075 740 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 ABCB7O75027 752 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 IPO13O94829 963 aaKnown RBP18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 GPX3P22352 226 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 SULT1E1P49888 294 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 CBX2Q14781 532 aaPredicted RBP18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 CYP51A1Q16850 503 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 SLC25A52Q3SY17 297 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 SPATS1Q496A3 300 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 AGAP7PQ5VUJ5 663 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 THOC7Q6I9Y2 204 aaKnown RBP18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 PDZD4Q76G19 769 aaPredicted RBP18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 GMIPQ9P107 970 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 ZNF639Q9UID6 485 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 A0A0J9YYE9 177 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 PFDN6O15212 129 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 IQCF3P0C7M6 154 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 DNAJB2P25686 324 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 PHKG1Q16816 387 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 EML3Q32P44 896 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms