RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 USP2O75604 605 aaPredicted RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 STARD3NLO95772 234 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 KRT8P05787 483 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 TSHRP16473 764 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 SLC7A2P52569 658 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 NLRP11P59045 1033 aaKnown RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 SLC25A11Q02978 314 aaKnown RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 ATP6AP1Q15904 470 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 CCBE1Q6UXH8 406 aaPredicted RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 DPP8Q6V1X1 898 aaPredicted RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 GADL1Q6ZQY3 521 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 PAGE2Q7Z2X7 111 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 DDIASQ8IXT1 998 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 RGL4Q8IZJ4 473 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 FBXL6Q8N531 539 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 DHRSXQ8N5I4 330 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 IL17RDQ8NFM7 739 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 JOSD2Q8TAC2 188 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 SIGLEC10Q96LC7 697 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 HEXIM2Q96MH2 286 aaKnown RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 CEP41Q9BYV8 373 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 MRPL47Q9HD33 250 aaKnown RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 AGPAT4Q9NRZ5 378 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 ZNF221Q9UK13 617 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 A0A1W2PQ72 361 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 HEATR9A2RTY3 570 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 MT-CO1P00395 513 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 YBX3P16989 372 aaKnown RBP eCLIP10.74□□□□□ -0.692e-9■□□□□ 10.1
RTN3-208ENST00000537981 KDELR1P24390 212 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 GNA15P30679 374 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 PTGS2P35354 604 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 TSPAN7P41732 249 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 HIST2H2ACQ16777 129 aaPredicted RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 OTUD3Q5T2D3 398 aaPredicted RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 BBS12Q6ZW61 710 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 GDPD3Q7L5L3 318 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 SAMD14Q8IZD0 417 aaPredicted RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 GALNT6Q8NCL4 622 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 EFHD1Q9BUP0 239 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 DHX35Q9H5Z1 703 aaKnown RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 C12orf10Q9HB07 376 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 CPNE5Q9HCH3 593 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 PAK1IP1Q9NWT1 392 aaPredicted RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 CACNA2D2Q9NY47 1150 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 CCDC167Q9P0B6 97 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 AASSQ9UDR5 926 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 CD300AQ9UGN4 299 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 CDY2AQ9Y6F7 541 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 CDY1Q9Y6F8 540 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 UBE4BO95155 1302 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 PTPRJQ12913 1337 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 WDR27A2RRH5 827 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 B8ZZF3 427 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 TK2O00142 265 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 KCNN4O15554 427 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 LRCH4O75427 683 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 UPK1BO75841 260 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 PIGNO95427 931 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 RBP1P09455 135 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 SNHG28P0DPA3 235 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 MTHFD1P11586 935 aaKnown RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 C19orf57Q0VDD7 668 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 CCNYL2Q5T2Q4 361 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 SH3PXD2AQ5TCZ1 1133 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 REP15Q6BDI9 236 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 USP51Q70EK9 711 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 OTOP1Q7RTM1 612 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 GALNT7Q86SF2 657 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 LINC00523Q86TU6 105 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 ABRAQ8N0Z2 381 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 TOR1AIP2Q8NFQ8 470 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 NPLOC4Q8TAT6 608 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 HDAC10Q969S8 669 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 SLC10A4Q96EP9 437 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 ST6GAL2Q96JF0 529 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 MS4A4AQ96JQ5 239 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 SMOC2Q9H3U7 446 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.73□□□□□ -0.69
RTN3-208ENST00000537981 ATP13A2Q9NQ11 1180 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 DPP3Q9NY33 737 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 SLC9A2Q9UBY0 812 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 TCRBV5S1A1TA0A578 114 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 KCNJ13O60928 360 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 ABCB7O75027 752 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 TADA2AO75478 443 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 METTL18O95568 372 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 JUNBP17275 347 aaPredicted RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 ACO1P21399 889 aaKnown RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 HIBADHP31937 336 aaKnown RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 TNFAIP2Q03169 654 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 ASPRV1Q53RT3 343 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 ARL13AQ5H913 290 aaPredicted RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 BRMS1LQ5PSV4 323 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 INTS11Q5TA45 600 aaKnown RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 AGAP9Q5VTM2 703 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 RPS27LQ71UM5 84 aaKnown RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 ZNF438Q7Z4V0 828 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms