RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 MEI4A8MW99 385 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 ZNF195O14628 629 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 SLC7A4O43246 635 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 WFS1O76024 890 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 SERPINA6P08185 405 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 GRIA4P48058 902 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 ERFP50548 548 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 NAGLUP54802 743 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 KHDC1Q4VXA5 237 aaKnown RBP17.53■□□□□ 0.4
SNX17-210ENST00000537606 FAM91A1Q658Y4 838 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 CHST9Q7L1S5 443 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 TMEM199Q8N511 208 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 FAM136AQ96C01 138 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 MFSD1Q9H3U5 465 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 RNPEPL1Q9HAU8 725 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 NOP53Q9NZM5 478 aaKnown RBP17.53■□□□□ 0.4
SNX17-210ENST00000537606 GREM1O60565 184 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 NDST3O95803 873 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 S1PR4O95977 384 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 CRABP2P29373 138 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 POU4F1Q01851 419 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 SEMA3AQ14563 771 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 KPNB1Q14974 876 aaKnown RBP17.53■□□□□ 0.4
SNX17-210ENST00000537606 ALG1LQ6GMV1 187 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 ZYG11AQ6WRX3 759 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 KIAA0408Q6ZU52 694 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 POU5F2Q8N7G0 328 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 KLHL23Q8NBE8 558 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 BRSK1Q8TDC3 778 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 WDR60Q8WVS4 1066 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 TMA16Q96EY4 203 aaKnown RBP17.53■□□□□ 0.4
SNX17-210ENST00000537606 CLPTM1LQ96KA5 538 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 PPP1R36Q96LQ0 422 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 SMG9Q9H0W8 520 aaKnown RBP17.53■□□□□ 0.4
SNX17-210ENST00000537606 VPS28Q9UK41 221 aa17.53■□□□□ 0.4
SNX17-210ENST00000537606 NEMP2A6NFY4 417 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 DLX3O60479 287 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 KLHL2O95198 593 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 PRLP01236 227 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 EPOP01588 193 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 CKMP06732 381 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 CR2P20023 1033 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 PPP3CCP48454 512 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 HECTD2Q5U5R9 776 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 TMC7Q7Z402 723 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 PIM3Q86V86 326 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 LPCAT1Q8NF37 534 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 STYXQ8WUJ0 223 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 ZBED2Q9BTP6 218 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 ZBP1Q9H171 429 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 FNDC3AQ9Y2H6 1198 aaKnown RBP17.52■□□□□ 0.4
SNX17-210ENST00000537606 FCF1Q9Y324 198 aaKnown RBP17.52■□□□□ 0.4
SNX17-210ENST00000537606 TARM1B6A8C7 271 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 TMCC1O94876 653 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 CXCL14O95715 111 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 MT-CO1P00395 513 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 CDKN2DP55273 166 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 MDGA1Q8NFP4 955 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 MAPK15Q8TD08 544 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 ANKRD49Q8WVL7 239 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 GPAMQ9HCL2 828 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 TAGLN3Q9UI15 199 aa17.52■□□□□ 0.4
SNX17-210ENST00000537606 APOBEC2Q9Y235 224 aaKnown RBP17.52■□□□□ 0.4
SNX17-210ENST00000537606 A0A1W2PRU2 124 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 K7ERQ8 282 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 KIAA0355O15063 1070 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 GLP2RO95838 553 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 CCDC166P0CW27 439 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 TPBGLP0DKB5 382 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 MPSTP25325 297 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 PGM1P36871 562 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 CSKP41240 450 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 WASHC2DQ5SRD0 308 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 LIPMQ5VYY2 423 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 TPGS1Q6ZTW0 290 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 ITIH5Q86UX2 942 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 SHKBP1Q8TBC3 707 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 DDX50Q9BQ39 737 aaKnown RBP17.51■□□□□ 0.39
SNX17-210ENST00000537606 FEM1AQ9BSK4 669 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 IGSF5Q9NSI5 407 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 CXXC1Q9P0U4 656 aaPredicted RBP17.51■□□□□ 0.39
SNX17-210ENST00000537606 C15orf41Q9Y2V0 281 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 VWA7Q9Y334 891 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 RAI2Q9Y5P3 530 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 CD3EAPO15446 510 aaKnown RBP17.51■□□□□ 0.39
SNX17-210ENST00000537606 APOA4P06727 396 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 CTSAP10619 480 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 COL6A2P12110 1019 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 BMP1P13497 986 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 PPM1AP35813 382 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 CDH18Q13634 790 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 PABPC1LQ4VXU2 614 aaKnown RBP17.51■□□□□ 0.39
SNX17-210ENST00000537606 ACSBG2Q5FVE4 666 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 ATXN7L2Q5T6C5 722 aaPredicted RBP17.51■□□□□ 0.39
SNX17-210ENST00000537606 FBXO46Q6PJ61 603 aaPredicted RBP17.51■□□□□ 0.39
SNX17-210ENST00000537606 TMEM207Q6UWW9 146 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 FIBCD1Q8N539 461 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 CCNYL1Q8N7R7 359 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 SLC22A17Q8WUG5 538 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 SREK1Q8WXA9 508 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms