RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 NOD2Q9HC29 1040 aa18.11■□□□□ 0.49
CCDC61-201ENST00000536603 SAE1Q9UBE0 346 aaPredicted RBP18.11■□□□□ 0.49
CCDC61-201ENST00000536603 DKK4Q9UBT3 224 aa18.11■□□□□ 0.49
CCDC61-201ENST00000536603 FTSJ1Q9UET6 329 aa18.11■□□□□ 0.49
CCDC61-201ENST00000536603 GUCA1BQ9UMX6 200 aa18.11■□□□□ 0.49
CCDC61-201ENST00000536603 DMTF1Q9Y222 760 aa18.11■□□□□ 0.49
CCDC61-201ENST00000536603 PCDHGC4Q9Y5F7 938 aa18.11■□□□□ 0.49
CCDC61-201ENST00000536603 PLXNA2O75051 1894 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.1■□□□□ 0.49
CCDC61-201ENST00000536603 TSPAN11A1L157 253 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 KCNK1O00180 336 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 TRAFD1O14545 582 aaPredicted RBP18.1■□□□□ 0.49
CCDC61-201ENST00000536603 SPINT1O43278 529 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 KRT86O43790 486 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 JCHAINP01591 159 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 WNT1P04628 370 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 CD38P28907 300 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 NR2C2P49116 596 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 PEX5P50542 639 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 RWDD2BP57060 319 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 AP1B1Q10567 949 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 TMEM259Q4ZIN3 620 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 KIAA1161Q6NSJ0 714 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 DHRS13Q6UX07 377 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 B4GALNT4Q76KP1 1039 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 ZSWIM9Q86XI8 627 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCDC61-201ENST00000536603 RNF10Q8N5U6 811 aaKnown RBP18.1■□□□□ 0.49
CCDC61-201ENST00000536603 OLFM3Q96PB7 478 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 HEMGNQ9BXL5 484 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 SLC17A9Q9BYT1 436 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 CA5BQ9Y2D0 317 aa18.1■□□□□ 0.49
CCDC61-201ENST00000536603 TP53BP1Q12888 1972 aaPredicted RBP18.1■□□□□ 0.49
CCDC61-201ENST00000536603 KNL1Q8NG31 2342 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 IGLON5A6NGN9 336 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 PRAMEF26H0Y7S4 382 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 PPP1R12AO14974 1030 aaPredicted RBP18.09■□□□□ 0.49
CCDC61-201ENST00000536603 PCDHGA12O60330 932 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 DFNA5O60443 496 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 DKK1O94907 266 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 FTCDO95954 541 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 PAK4O96013 591 aaPredicted RBP18.09■□□□□ 0.49
CCDC61-201ENST00000536603 TGM2P21980 687 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 COPS2P61201 443 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 STAT4Q14765 748 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 PPP2R5EQ16537 467 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 RALGPS1Q5JS13 557 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 BZW1Q7L1Q6 419 aaKnown RBP18.09■□□□□ 0.49
CCDC61-201ENST00000536603 PDCD6IPQ8WUM4 868 aaKnown RBP18.09■□□□□ 0.49
CCDC61-201ENST00000536603 ALG3Q92685 438 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 SKA1Q96BD8 255 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 ECHDC3Q96DC8 303 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 TRIM44Q96DX7 344 aaPredicted RBP18.09■□□□□ 0.49
CCDC61-201ENST00000536603 MYOCQ99972 504 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 SEMA3CQ99985 751 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 POLR1EQ9GZS1 481 aaKnown RBP18.09■□□□□ 0.49
CCDC61-201ENST00000536603 FZD3Q9NPG1 666 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 PCDH12Q9NPG4 1184 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 KCND1Q9NSA2 647 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 PACSIN2Q9UNF0 486 aaPredicted RBP18.09■□□□□ 0.49
CCDC61-201ENST00000536603 ZKSCAN5Q9Y2L8 839 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 TTLL3Q9Y4R7 772 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 CAPN6Q9Y6Q1 641 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 TRPM6Q9BX84 2022 aa18.09■□□□□ 0.49
CCDC61-201ENST00000536603 A0A1W2PR77 199 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 VILLO15195 856 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 ZSCAN12O43309 604 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 MMP20O60882 483 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 PRKCGP05129 697 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 HLA-DQB2P05538 268 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 PECAM1P16284 738 aaPredicted RBP18.08■□□□□ 0.48
CCDC61-201ENST00000536603 AKT2P31751 481 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 SUOXP51687 545 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 POLR2LP62875 67 aaKnown RBP18.08■□□□□ 0.48
CCDC61-201ENST00000536603 SEMG2Q02383 582 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 ELP6Q0PNE2 266 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 SGCGQ13326 291 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 FGL2Q14314 439 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 SLC45A4Q5BKX6 768 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 FAM182AQ5T1J6 154 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 ERAP2Q6P179 960 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 CXorf40AQ8TE69 158 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 P3H4Q92791 437 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 HAUS1Q96CS2 278 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 WRAP53Q9BUR4 548 aaKnown RBP18.08■□□□□ 0.48
CCDC61-201ENST00000536603 C1QTNF2Q9BXJ5 285 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 BRD8Q9H0E9 1235 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 HAUS2Q9NVX0 235 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 SEPT10Q9P0V9 454 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 AMACRQ9UHK6 382 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 ANKRD36A6QL64 1941 aa18.08■□□□□ 0.48
CCDC61-201ENST00000536603 TLR4O00206 839 aa18.07■□□□□ 0.48
CCDC61-201ENST00000536603 RIOK3O14730 519 aaKnown RBP18.07■□□□□ 0.48
CCDC61-201ENST00000536603 HTRA2O43464 458 aaPredicted RBP18.07■□□□□ 0.48
CCDC61-201ENST00000536603 SOCS5O75159 536 aa18.07■□□□□ 0.48
CCDC61-201ENST00000536603 PYGMP11217 842 aa18.07■□□□□ 0.48
CCDC61-201ENST00000536603 HNRNPA2B1P22626 353 aaKnown RBP18.07■□□□□ 0.48
CCDC61-201ENST00000536603 CES1P23141 567 aa18.07■□□□□ 0.48
CCDC61-201ENST00000536603 HNF1BP35680 557 aa18.07■□□□□ 0.48
CCDC61-201ENST00000536603 CETN2P41208 172 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms