RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PGLSO95336 258 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 CPP00450 1065 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 CSF2P04141 144 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 PCCBP05166 539 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 HLA-DQB2P05538 268 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 CCNB1P14635 433 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 JUNDP17535 347 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 CTPS1P17812 591 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 FECHP22830 423 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 SLC1A1P43005 524 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 ACADVLP49748 655 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.12
UBE3B-206ENST00000536398 DYNLT1P63172 113 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 C1orf61Q13536 156 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 SPA17Q15506 151 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 PROX2Q3B8N5 592 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 LRRC38Q5VT99 294 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 KCTD16Q68DU8 428 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 SLC9A4Q6AI14 798 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 UNQ6494/PRO21346Q6UXR6 183 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 TSPAN33Q86UF1 283 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 PARGQ86W56 976 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 RFX6Q8HWS3 928 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 RHOT1Q8IXI2 618 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 CCDC13Q8IYE1 715 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 ARRDC2Q8TBH0 407 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 PIH1D2Q8WWB5 315 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 IFT43Q96FT9 208 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 C1QTNF7Q9BXJ2 289 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 MAK16Q9BXY0 300 aaKnown RBP14.33□□□□□ -0.12
UBE3B-206ENST00000536398 TDRD6O60522 2096 aaKnown RBP14.33□□□□□ -0.12
UBE3B-206ENST00000536398 ANKRD36A6QL64 1941 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 LRRK1Q38SD2 2015 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 ZNF487B1APH4 448 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 KCNK1O00180 336 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 SCAMP1O15126 338 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 SOCS5O75159 536 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 NDUFA10O95299 355 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 JCHAINP01591 159 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 ALPIP09923 528 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 ELFN1P0C7U0 828 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 KRT10P13645 584 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 NME1P15531 152 aaKnown RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 MX2P20592 715 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 LHCGRP22888 699 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 CYLC1P35663 651 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 MARCKSL1P49006 195 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 THOP1P52888 689 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 HADHBP55084 474 aaKnown RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 YPEL5P62699 121 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 ADCY2Q08462 1091 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 ZNF211Q13398 564 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 CNGA3Q16281 694 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 DENND2CQ68D51 928 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 TIGD7Q6NT04 549 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 CCNI2Q6ZMN8 369 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 RFLNAQ6ZTI6 216 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 TMPRSS7Q7RTY8 843 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 HSD11B1LQ7Z5J1 315 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 CBARPQ8N350 705 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 CNTD1Q8N815 330 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 ACRBPQ8NEB7 543 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 ZNF548Q8NEK5 533 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 OR4C6Q8NH72 309 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 LMX1AQ8TE12 382 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 FATE1Q969F0 183 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 HDAC11Q96DB2 347 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 COQ10AQ96MF6 247 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 APOOQ9BUR5 198 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 CEP41Q9BYV8 373 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 POLR1EQ9GZS1 481 aaKnown RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 SAE1Q9UBE0 346 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-206ENST00000536398 PHTF1Q9UMS5 762 aa14.32□□□□□ -0.12
UBE3B-206ENST00000536398 CFAP69A5D8W1 941 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 NPIPB15A6NHN6 443 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-206ENST00000536398 K7ESM1 405 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 APOL1O14791 398 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 FZD6O60353 706 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 GCATO75600 419 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 CELA2BP08218 269 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-206ENST00000536398 MMP2P08253 660 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 CKMT2P17540 419 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 VIPR1P32241 457 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 CDKN2BP42772 138 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 HNRNPKP61978 463 aaKnown RBP eCLIP14.31□□□□□ -0.12
UBE3B-206ENST00000536398 PPIDQ08752 370 aaKnown RBP14.31□□□□□ -0.12
UBE3B-206ENST00000536398 AP1B1Q10567 949 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 ZBTB17Q13105 803 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 ACOX1Q15067 660 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 AGERQ15109 404 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 TCEA2Q15560 299 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 TAZQ16635 292 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 DEFB133Q30KQ1 61 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 RALGPS1Q5JS13 557 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 ARMC12Q5T9G4 340 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 ENPP7Q6UWV6 458 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 SPOCD1Q6ZMY3 1216 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 TMTC1Q8IUR5 882 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 TMEM139Q8IV31 216 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms