RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 POLR2FP61218 127 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 FMO1Q01740 532 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SERINC3Q13530 473 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 DPCR1Q3MIW9 517 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 C14orf28Q4W4Y0 310 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TCP11X2Q5H9J9 407 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CERCAMQ5T4B2 595 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ATG14Q6ZNE5 492 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PYROXD2Q8N2H3 581 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 C3orf20Q8ND61 904 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 GPR156Q8NFN8 814 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CENPIQ92674 756 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CINPQ9BW66 212 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MAGEB5Q9BZ81 275 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 WDR26Q9H7D7 661 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NLRC4Q9NPP4 1024 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 FAM207AQ9NSI2 230 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 LRIT1Q9P2V4 623 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 APPL1Q9UKG1 709 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 DGKBQ9Y6T7 804 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RNF215Q9Y6U7 377 aa13.05□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PIEZO2Q9H5I5 2752 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ANKRD36A6QL64 1941 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 LRP4O75096 1905 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ARHGAP42A6NI28 874 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 DAPK3O43293 454 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CCP110O43303 1012 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PALMO75781 387 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PRKCGP05129 697 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NFKBIAP25963 317 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RFC1P35251 1148 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PPM1FP49593 454 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ATP1A2P50993 1020 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 GSCP56915 257 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 POLR2LP62875 67 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 BCL2L1Q07817 233 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 AGERQ15109 404 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 DPY19L2P1Q6NXN4 242 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 DCUN1D2Q6PH85 259 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 WDR59Q6PJI9 974 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SPRED1Q7Z699 444 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 VASH2Q86V25 355 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 EXD3Q8N9H8 876 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CCDC112Q8NEF3 446 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 USP7Q93009 1102 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MCEEQ96PE7 176 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 KLC2Q9H0B6 622 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NOL6Q9H6R4 1146 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SUDS3Q9H7L9 328 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SP110Q9HB58 689 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CYP4F12Q9HCS2 524 aa13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SAMSN1Q9NSI8 373 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-207ENST00000535958 A0A1W2PQC6 194 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CFAP69A5D8W1 941 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RHPN2P1A8MT19 583 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 WASH4PA8MWX3 477 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NUDT21O43809 227 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RECQL5O94762 991 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 FAM87AP0C7U9 286 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 HTR7P34969 479 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NDST2P52849 883 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ILF3Q12906 894 aaKnown RBP eCLIP13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PEX6Q13608 980 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ACOX1Q15067 660 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CYTH1Q15438 398 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 AMZ1Q400G9 498 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 SPECC1LQ69YQ0 1117 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PIM3Q86V86 326 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CAMK1DQ8IU85 385 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 UMODL1-AS1Q8N2C9 162 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 OR1E3Q8WZA6 343 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 VOPP1Q96AW1 172 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 VPS16Q9H269 839 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 GANQ9H2C0 597 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 FGF22Q9HCT0 170 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 MRPL40Q9NQ50 206 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 IL17BQ9UHF5 180 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 FZD10Q9ULW2 581 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 LRRK1Q38SD2 2015 aa13.03□□□□□ -0.32
TNFRSF1A-207ENST00000535958 TMEM202A6NGA9 273 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SIGLEC16A6NMB1 481 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 STMND1H3BQB6 276 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 EEF2KO00418 725 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 TNFRSF10CO14798 259 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 TEX33O43247 280 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 NOBOXO60393 691 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PRAMEF11O60813 436 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CPNE6O95741 557 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 UNGP13051 313 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CHRNB2P17787 502 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ZNF143P52747 638 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SRSF6Q13247 344 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CLEC16AQ2KHT3 1053 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms