RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 GPR179Q6PRD1 2367 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 A0A1W2PPC4 97 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 ANKRD66B4E2M5 251 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 SLC31A1O15431 190 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 PHF2O75151 1096 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 ANXA9O76027 345 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 NDST3O95803 873 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 PAK4O96013 591 aaPredicted RBP13.18□□□□□ -0.3
TMEM258-202ENST00000535042 AGTP01019 485 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 RETP07949 1114 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 ATXN1LP0C7T5 689 aaKnown RBP13.18□□□□□ -0.3
TMEM258-202ENST00000535042 GM2AP17900 193 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 CA4P22748 312 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 CD27P26842 260 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 VIPR1P32241 457 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 ADRA1AP35348 466 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 LIG3P49916 1009 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 EPHB1P54762 984 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 GEMP55040 296 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 RPL26P61254 145 aaKnown RBP13.18□□□□□ -0.3
TMEM258-202ENST00000535042 RPS21P63220 83 aaKnown RBP13.18□□□□□ -0.3
TMEM258-202ENST00000535042 MPP3Q13368 585 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 SPARCL1Q14515 664 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 CDKN3Q16667 212 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 WDR45BQ5MNZ6 344 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
TMEM258-202ENST00000535042 KCTD11Q693B1 232 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 KIAA1161Q6NSJ0 714 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 CRTC1Q6UUV9 634 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 LIPIQ6XZB0 460 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 DCLK2Q8N568 766 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 ATL2Q8NHH9 583 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 CXorf40AQ8TE69 158 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 SLC17A9Q9BYT1 436 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 MIR1-1HGQ9H1L0 117 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 SMOC1Q9H4F8 434 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 RPL26L1Q9UNX3 145 aaKnown RBP13.18□□□□□ -0.3
TMEM258-202ENST00000535042 CA5BQ9Y2D0 317 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 COQ6Q9Y2Z9 468 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
TMEM258-202ENST00000535042 CAPN8A6NHC0 703 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 PATE3B3GLJ2 98 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 RAD51BO15315 384 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 HEXIM1O94992 359 aaKnown RBP13.17□□□□□ -0.3
TMEM258-202ENST00000535042 EPOP01588 193 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 PIRTP0C851 137 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 C6P13671 934 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 MPLP40238 635 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 GRIA4P48058 902 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 PRPSAP1Q14558 356 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 TRIP13Q15645 432 aaPredicted RBP13.17□□□□□ -0.3
TMEM258-202ENST00000535042 CNGA3Q16281 694 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 SIRPB2Q5JXA9 342 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 SYCP2LQ5T4T6 812 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 CCDC137Q6PK04 289 aaKnown RBP13.17□□□□□ -0.3
TMEM258-202ENST00000535042 RANBP10Q6VN20 620 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 KDM7AQ6ZMT4 941 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 RFLNAQ6ZTI6 216 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 USP45Q70EL2 814 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 GSTA5Q7RTV2 222 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 ZSCAN30Q86W11 494 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 CBARPQ8N350 705 aaPredicted RBP13.17□□□□□ -0.3
TMEM258-202ENST00000535042 ZCCHC9Q8N567 271 aaKnown RBP13.17□□□□□ -0.3
TMEM258-202ENST00000535042 SLC25A41Q8N5S1 370 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 CCDC89Q8N998 374 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 RMDN1Q96DB5 314 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 IFT43Q96FT9 208 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 SLC6A18Q96N87 628 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 KLF6Q99612 283 aaPredicted RBP13.17□□□□□ -0.3
TMEM258-202ENST00000535042 MYOCQ99972 504 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 FICDQ9BVA6 458 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 DDX47Q9H0S4 455 aaKnown RBP13.17□□□□□ -0.3
TMEM258-202ENST00000535042 FZD3Q9NPG1 666 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 AAR2Q9Y312 384 aaKnown RBP13.17□□□□□ -0.3
TMEM258-202ENST00000535042 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 PCDHGA5Q9Y5G8 931 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 SPO11Q9Y5K1 396 aa13.17□□□□□ -0.3
TMEM258-202ENST00000535042 THADAQ6YHU6 1953 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 GOLGA6L10A0A0M3HER8 536 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 GOLGA8CPA6NN73 597 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 USP12O75317 370 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 TM7SF2O76062 418 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 CYP2A6P11509 494 aaPredicted RBP13.16□□□□□ -0.3
TMEM258-202ENST00000535042 TGM1P22735 817 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 PAFAH1B1P43034 410 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 FNTAP49354 379 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 SLC1A5Q15758 541 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 SETMARQ53H47 684 aaPredicted RBP13.16□□□□□ -0.3
TMEM258-202ENST00000535042 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 DENND5AQ6IQ26 1287 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 LAYNQ6UX15 382 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 HSD11B1LQ7Z5J1 315 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 NDUFAF2Q8N183 169 aa13.16□□□□□ -0.3
TMEM258-202ENST00000535042 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
TMEM258-202ENST00000535042 ASB12Q8WXK4 309 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms