RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 INSIG1O15503 277 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 RRP8O43159 456 aaKnown RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 BUB1BO60566 1050 aaPredicted RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 MMP20O60882 483 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 FAM228BP0C875 321 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 SKILP12757 684 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 SPINK2P20155 84 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 EIF4A3P38919 411 aaKnown RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 MMP13P45452 471 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 LIG3P49916 1009 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 CLDN2P57739 230 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 WSCD2Q2TBF2 565 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 PPP6R3Q5H9R7 873 aaPredicted RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 FAXCQ5TGI0 409 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 SARM1Q6SZW1 724 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 LRRC69Q6ZNQ3 347 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 HDAC11Q96DB2 347 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 SCRN2Q96FV2 425 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 WBP1Q96G27 269 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 LYSMD1Q96S90 227 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 DPH1Q9BZG8 443 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 POLR1EQ9GZS1 481 aaKnown RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 TSPY26PQ9H489 355 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 NFKBIL1Q9UBC1 381 aaPredicted RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 KLQ9UEF7 1012 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 GPSM3Q9Y4H4 160 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 COL27A1Q8IZC6 1860 aaPredicted RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 DOCK9Q9BZ29 2069 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 USP34Q70CQ2 3546 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 TAF4O00268 1085 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 DFFAO00273 331 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 IVLP07476 585 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 ELFN1P0C7U0 828 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 HK3P52790 923 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 ARMC12Q5T9G4 340 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 VSTM4Q8IW00 320 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 DTX3LQ8TDB6 740 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 KLK6Q92876 244 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 SCARF2Q96GP6 870 aaPredicted RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 RMI1Q9H9A7 625 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 GPATCH2LQ9NWQ4 482 aa10.44□□□□□ -0.74
CSDE1-217ENST00000534699 TRNAU1APQ9NX07 287 aaKnown RBP10.44□□□□□ -0.74
CSDE1-217ENST00000534699 CNOT1A5YKK6 2376 aaKnown RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 LY6G6EA0A0G2JKS1 128 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 GPR89AB7ZAQ6 455 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 RNF103O00237 685 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 MTSS1O43312 755 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 HEXIM1O94992 359 aaKnown RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 PGLSO95336 258 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 GPR89BP0CG08 455 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 MYCLP1P12525 358 aaPredicted RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 CTSEP14091 401 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 IL1R2P27930 398 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 GARSP41250 739 aaKnown RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 SRP54P61011 504 aaKnown RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 RBM44Q6ZP01 1051 aaKnown RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 NPWQ8N729 165 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 PNPLA1Q8N8W4 532 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 IFI44Q8TCB0 444 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 LMX1AQ8TE12 382 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 LIN37Q96GY3 246 aaPredicted RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 TMEM74Q96NL1 305 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 TEX101Q9BY14 249 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 MAGEB5Q9BZ81 275 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 APPL1Q9UKG1 709 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 U3KQA8 63 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 GON4LQ3T8J9 2241 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 KMT2BQ9UMN6 2715 aaPredicted RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 FZD6O60353 706 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 KRT37O76014 449 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 AMPD1P23109 780 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 IFI35P80217 286 aaPredicted RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 SQSTM1Q13501 440 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 NR1D2Q14995 579 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 TBC1D25Q3MII6 688 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 ADAMTSL4Q6UY14 1074 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 OR56A4Q8NGH8 313 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 FGF11Q92914 225 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 CELF6Q96J87 481 aaKnown RBP10.43□□□□□ -0.74
CSDE1-217ENST00000534699 DEF6Q9H4E7 631 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 POLR1BQ9H9Y6 1135 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 FZD3Q9NPG1 666 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 CTTNBP2NLQ9P2B4 639 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 ACTL7AQ9Y615 435 aa10.43□□□□□ -0.74
CSDE1-217ENST00000534699 NTN3O00634 580 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-217ENST00000534699 ATMINO43313 823 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-217ENST00000534699 PIGNO95427 931 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 CASP14P31944 242 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 NR2C2P49116 596 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 TARDBPQ13148 414 aaKnown RBP eCLIP10.42□□□□□ -0.74
CSDE1-217ENST00000534699 DPYSL3Q14195 570 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 ANKRD20A8PQ5CZ79 823 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 PDPK2PQ6A1A2 396 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 PNCKQ6P2M8 343 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 CAMK1DQ8IU85 385 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 KCTD6Q8NC69 237 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 TSEN2Q8NCE0 465 aaKnown RBP10.42□□□□□ -0.74
CSDE1-217ENST00000534699 KIAA1524Q8TCG1 905 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 MAPK15Q8TD08 544 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms