RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 HEATR9A2RTY3 570 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 PPP6CO00743 305 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 AKAP10O43572 662 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 CTSHP09668 335 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 TMCO5AQ8N6Q1 288 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 TSPAN14Q8NG11 270 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 RIN3Q8TB24 985 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 DLG3Q92796 817 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 ASB9Q96DX5 294 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 EGFL7Q9UHF1 273 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 DSEQ9UL01 958 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 CRYL1Q9Y2S2 319 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 ZSWIM8A7E2V4 1837 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 GABRDO14764 452 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 MYL3P08590 195 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 GRIA3P42263 894 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 KCNC1P48547 511 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 TFAP2DQ7Z6R9 452 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 MYLPFQ96A32 169 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 EMID1Q96A84 441 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-226ENST00000533820 MAML3Q96JK9 1138 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 IGSF5Q9NSI5 407 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 HCAR3P49019 387 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 CSRP3P50461 194 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 IKBKEQ14164 716 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 KIF19Q2TAC6 998 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 OR52K2Q8NGK3 314 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 NPLOC4Q8TAT6 608 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 SLCO4A1Q96BD0 722 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 KLHL5Q96PQ7 755 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 TMEM209Q96SK2 561 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 TINF2Q9BSI4 451 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.42■□□□□ 0.7
CAPN1-226ENST00000533820 VPS28Q9UK41 221 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 FAF1Q9UNN5 650 aaPredicted RBP19.42■□□□□ 0.7
CAPN1-226ENST00000533820 LRRC14BA6NHZ5 514 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 IDO1P14902 403 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 DMPKQ09013 629 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 MFSD10Q14728 455 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 BHLHA9Q7RTU4 235 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 LIMS2Q7Z4I7 341 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 ARHGAP12Q8IWW6 846 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 SLC10A4Q96EP9 437 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 ZFRQ96KR1 1074 aaKnown RBP19.42■□□□□ 0.7
CAPN1-226ENST00000533820 RBM38Q9H0Z9 239 aaKnown RBP19.42■□□□□ 0.7
CAPN1-226ENST00000533820 ZNF696Q9H7X3 374 aa19.42■□□□□ 0.7
CAPN1-226ENST00000533820 TFPTP0C1Z6 253 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 LRPAP1P30533 357 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 STX5Q13190 355 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 HERC3Q15034 1050 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 GPR158Q5T848 1215 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 GET4Q7L5D6 327 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-226ENST00000533820 IQCF2Q8IXL9 164 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 LRRC43Q8N309 656 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 CANT1Q8WVQ1 401 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 C3orf30Q96M34 536 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 UBFD1O14562 309 aaKnown RBP19.41■□□□□ 0.7
CAPN1-226ENST00000533820 PAGE1O75459 146 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 ANXA9O76027 345 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 IPO13O94829 963 aaKnown RBP19.41■□□□□ 0.7
CAPN1-226ENST00000533820 OXSR1O95747 527 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-226ENST00000533820 F9P00740 461 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 SCNN1GP51170 649 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 YBX1P67809 324 aaKnown RBP19.41■□□□□ 0.7
CAPN1-226ENST00000533820 DCLRE1AQ6PJP8 1040 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 GPR142Q7Z601 462 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 PELI3Q8N2H9 469 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 UNC93B1Q9H1C4 597 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 KCTD3Q9Y597 815 aa19.41■□□□□ 0.7
CAPN1-226ENST00000533820 SMIM35A0A1B0GVV1 85 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 NR5A2O00482 541 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 MAFKO60675 156 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 CHRM3P20309 590 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 BRCC3P46736 316 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 WNT3AP56704 352 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 LRP8Q14114 963 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 FRG1Q14331 258 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 CAPRIN1Q14444 709 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 PTPRCAPQ14761 206 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 ZBTB49Q6ZSB9 765 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 TTC16Q8NEE8 873 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 SHCBP1Q8NEM2 672 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 FNDC8Q8TC99 324 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 FCRL2Q96LA5 508 aaPredicted RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 SPAG4Q9NPE6 437 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 DMTF1Q9Y222 760 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 RBMX2Q9Y388 322 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 HHLA1C9JL84 531 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 NPHS1O60500 1241 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 SNRPB2P08579 225 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 PRKAA2P54646 552 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 NR1H2P55055 460 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 RPL26P61254 145 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 IFNEQ86WN2 208 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 MRGPRX2Q96LB1 330 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 NT5MQ9NPB1 228 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 TMLHEQ9NVH6 421 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 FAIMQ9NVQ4 179 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 SELENONQ9NZV5 590 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 CNOT6Q9ULM6 557 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms