RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 NUMBP49757 651 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 SLC5A3P53794 718 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 ATP6V0D1P61421 351 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 VGLL4Q14135 290 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 BRMS1LQ5PSV4 323 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 INTS11Q5TA45 600 aaKnown RBP9.44□□□□□ -0.9
BDNF-216ENST00000532997 HECTD2Q5U5R9 776 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 WSCD1Q658N2 575 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 SPPL2CQ8IUH8 684 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 TTC16Q8NEE8 873 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 NDRG1Q92597 394 aaKnown RBP9.44□□□□□ -0.9
BDNF-216ENST00000532997 C12orf43Q96C57 262 aaKnown RBP9.44□□□□□ -0.9
BDNF-216ENST00000532997 ISOC1Q96CN7 298 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 HSPBAP1Q96EW2 488 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 KLHL32Q96NJ5 620 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 ACTR3BQ9P1U1 418 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 HES2Q9Y543 173 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 V9GYQ6 96 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 ARID2Q68CP9 1835 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 PHIPQ8WWQ0 1821 aa9.44□□□□□ -0.9
BDNF-216ENST00000532997 SMIM28A0A1B0GU29 152 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 A8MT66 165 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 TMEM233B4DJY2 109 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 CLDN5O00501 218 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 LRIG2O94898 1065 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 ODC1P11926 461 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 BMP2P12643 396 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 HGFP14210 728 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 IMPDH1P20839 514 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 LMO2P25791 158 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 SLC5A2P31639 672 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 RAD23AP54725 363 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 OTUD3Q5T2D3 398 aaPredicted RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 MARC1Q5VT66 337 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 FAM35AQ86V20 835 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 ZBTB8BQ8NAP8 495 aaPredicted RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 SPPL2BQ8TCT7 592 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 RSPH1Q8WYR4 309 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 VPS33AQ96AX1 596 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 SENP8Q96LD8 212 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 TRIM54Q9BYV2 358 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 MEAF6Q9HAF1 191 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 PALMDQ9NP74 551 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 NT5MQ9NPB1 228 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 PDGFCQ9NRA1 345 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 CCM2LQ9NUG4 571 aaPredicted RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 FAIMQ9NVQ4 179 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 SCN3BQ9NY72 215 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 LMCD1Q9NZU5 365 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 PGAP2Q9UHJ9 254 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 POLG2Q9UHN1 485 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 DAPK2Q9UIK4 370 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 FZD1Q9UP38 647 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 C9IYK1 514 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 CCR10P46092 362 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 CDH15P55291 814 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 INHBEP58166 350 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 SCAPQ12770 1279 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 OLIG2Q13516 323 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 ZNF460Q14592 562 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 STK32CQ86UX6 486 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 ZDHHC13Q8IUH4 622 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 FIBCD1Q8N539 461 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 TMEM102Q8N9M5 508 aaPredicted RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 TXNDC5Q8NBS9 432 aaKnown RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 SH3GL1Q99961 368 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 MTG1Q9BT17 334 aaPredicted RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 ATXN3LQ9H3M9 355 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 PLAC1Q9HBJ0 212 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 MAGEL2Q9UJ55 1249 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 GNPTGQ9UJJ9 305 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 CDH9Q9ULB4 789 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 AP3M1Q9Y2T2 418 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 PCDHGA7Q9Y5G6 932 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 E5RI56 91 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 MATN3O15232 486 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 GSRP00390 522 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 GMPRP36959 345 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 SLC26A3P40879 764 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 WNT3AP56704 352 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 IL1RL1Q01638 556 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 GALNT1Q10472 559 aaPredicted RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 BFSP2Q13515 415 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 ATP6AP1LQ52LC2 224 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 KLHL35Q6PF15 583 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 LILRA2Q8N149 483 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 TRPV3Q8NET8 790 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 GPRC5AQ8NFJ5 357 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 STAG3L4Q8TBR4 150 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 S100ZQ8WXG8 99 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 POP5Q969H6 163 aaKnown RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 C17orf80Q9BSJ5 609 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 FTHL17Q9BXU8 183 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 DNAJC5Q9H3Z4 198 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 NXF3Q9H4D5 531 aaKnown RBP9.43□□□□□ -0.9
BDNF-216ENST00000532997 ARMC1Q9NVT9 282 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 COQ6Q9Y2Z9 468 aa9.43□□□□□ -0.9
BDNF-216ENST00000532997 RGPD3A6NKT7 1758 aaPredicted RBP9.42□□□□□ -0.9
BDNF-216ENST00000532997 RGPD4Q7Z3J3 1758 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms