RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 FAXDC2Q96IV6 333 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 KLHL4Q9C0H6 718 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 TDP1Q9NUW8 608 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 RCOR3Q9P2K3 495 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 AP4S1Q9Y587 144 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 INSL5Q9Y5Q6 135 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 GLYATL1P3A0A0U1RQE8 302 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 AADACL2Q6P093 401 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 OR4L1Q8NH43 312 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 FIG4Q92562 907 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 ZNF75CPQ92670 426 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 SIPA1Q96FS4 1042 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 MBOAT7Q96N66 472 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 FAIM2Q9BWQ8 316 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 MCOLN1Q9GZU1 580 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 NCDNQ9UBB6 729 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 PCYOX1Q9UHG3 505 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 TRBV23OR9-2A0A075B6M9 112 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 FAM220BPB1ANY3 271 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 PABPC1P11940 636 aaKnown RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 FASP25445 335 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 HNRNPH1P31943 449 aaKnown RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 PTPN9P43378 593 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 CLCN5P51795 746 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 NUP107P57740 925 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 MRPS15P82914 257 aaKnown RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 ZNF398Q8TD17 642 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 GLOD4Q9HC38 313 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 PCDHGC3Q9UN70 934 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 PHGDHO43175 533 aaKnown RBP11.33□□□□□ -0.59
PTPRK-221ENST00000532331 ITGAVP06756 1048 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 LTA4HP09960 611 aaKnown RBP11.33□□□□□ -0.59
PTPRK-221ENST00000532331 MYBL2P10244 700 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 ITGAXP20702 1163 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 GPR141Q7Z602 305 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 PARGQ86W56 976 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 TMEM132CQ8N3T6 1108 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 OR7D4Q8NG98 312 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 VPS45Q9NRW7 570 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 KLHL20Q9Y2M5 609 aa11.33□□□□□ -0.59
PTPRK-221ENST00000532331 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.59
PTPRK-221ENST00000532331 PITPNM1O00562 1244 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 TPP1O14773 563 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 MRASO14807 208 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 ETS1P14921 441 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 RXRGP48443 463 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 RPIAP49247 311 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 AP1S1P61966 158 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 HID1Q8IV36 788 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 CYP4Z2PQ8N1L4 340 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 ZNF461Q8TAF7 563 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 COL26A1Q96A83 441 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 RPL10LQ96L21 214 aaKnown RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 TSHRP16473 764 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 PLK1P53350 603 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SUZ12Q15022 739 aaKnown RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 UAP1L1Q3KQV9 507 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 TXNDC8Q6A555 127 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 BBS12Q6ZW61 710 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 CIR1Q86X95 450 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SPPL2AQ8TCT8 520 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 STK32AQ8WU08 396 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 CCDC189A1A4V9 331 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 IRAK2O43187 625 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 MMP8P22894 467 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 ENPEPQ07075 957 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 USP39Q53GS9 565 aaKnown RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 MORN1Q5T089 497 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 IL27RAQ6UWB1 636 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 DHFR2Q86XF0 187 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 BAP1Q92560 729 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SLC38A3Q99624 504 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 RAD21L1Q9H4I0 556 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 MINDY3Q9H8M7 445 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 GKN1Q9NS71 199 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 CACNG4Q9UBN1 327 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SNX6Q9UNH7 406 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 CAB39Q9Y376 341 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 NID2Q14112 1375 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 hCG_1818297A0A087WSY0 165 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SERPINB3P29508 390 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 RPL22P35268 128 aaKnown RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SPAM1P38567 509 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 MLLT1Q03111 559 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 GRM2Q14416 872 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 NCF4Q15080 339 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 ARHGAP17Q68EM7 881 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 MFSD5Q6N075 450 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SCAMP5Q8TAC9 235 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 SLC22A17Q8WUG5 538 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 MTFMTQ96DP5 389 aaKnown RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 CERS2Q96G23 380 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 NECTIN4Q96NY8 510 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 FAM83DQ9H4H8 585 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 MRPS33Q9Y291 106 aaKnown RBP11.33□□□□□ -0.6
PTPRK-221ENST00000532331 ZNF711Q9Y462 761 aa11.33□□□□□ -0.6
PTPRK-221ENST00000532331 TMEM191CA6NGB0 347 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 DHX15O43143 795 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms