RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MFSD7Q6UXD7 560 aa23.08■■□□□ 1.29
CAPN1-222ENST00000532285 RAD9BQ6WBX8 426 aa23.08■■□□□ 1.29
CAPN1-222ENST00000532285 LRRN4Q8WUT4 740 aa23.08■■□□□ 1.29
CAPN1-222ENST00000532285 LGMNQ99538 433 aa23.08■■□□□ 1.29
CAPN1-222ENST00000532285 BAG1Q99933 345 aaPredicted RBP23.08■■□□□ 1.29
CAPN1-222ENST00000532285 B4GALT6Q9UBX8 382 aa23.08■■□□□ 1.29
CAPN1-222ENST00000532285 NEUROG3Q9Y4Z2 214 aa23.08■■□□□ 1.29
CAPN1-222ENST00000532285 RAI2Q9Y5P3 530 aa23.08■■□□□ 1.29
CAPN1-222ENST00000532285 CHD8Q9HCK8 2581 aa23.08■■□□□ 1.29
CAPN1-222ENST00000532285 NEMP2A6NFY4 417 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 H3BM21 787 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 PGLSO95336 258 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 NME1P15531 152 aaKnown RBP23.07■■□□□ 1.28
CAPN1-222ENST00000532285 CDKN2BP42772 138 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 PEX5P50542 639 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 TFDP2Q14188 446 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 PDK1Q15118 436 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 TAZQ16635 292 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 HS1BP3Q53T59 392 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 TPRG1LQ5T0D9 272 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 KDM7AQ6ZMT4 941 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 DAAM2Q86T65 1068 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 TPCN2Q8NHX9 752 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 GOLPH3Q9H4A6 298 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 UCKL1Q9NWZ5 548 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.07■■□□□ 1.28
CAPN1-222ENST00000532285 TTLL3Q9Y4R7 772 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 ACACBO00763 2458 aa23.07■■□□□ 1.28
CAPN1-222ENST00000532285 TPRP12270 2363 aaKnown RBP23.06■■□□□ 1.28
CAPN1-222ENST00000532285 FAM221BA6H8Z2 402 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 RCCD1A6NED2 376 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 BTNL10A8MVZ5 291 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 A8MX80 341 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 RECQL5O94762 991 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-222ENST00000532285 CYP2A6P11509 494 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-222ENST00000532285 KRT10P13645 584 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 VIPR1P32241 457 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 DSC2Q02487 901 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 EIF2B5Q13144 721 aaKnown RBP23.06■■□□□ 1.28
CAPN1-222ENST00000532285 ZNF211Q13398 564 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-222ENST00000532285 MTM1Q13496 603 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 INPP5AQ14642 412 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 MACC1Q6ZN28 852 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 KATNAL2Q8IYT4 538 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 RCOR2Q8IZ40 523 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 NDUFAF2Q8N183 169 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 OR4C6Q8NH72 309 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 SCRN2Q96FV2 425 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 BRD8Q9H0E9 1235 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 KLF15Q9UIH9 416 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 SALL4Q9UJQ4 1053 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 KLK13Q9UKR3 277 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 REXO2Q9Y3B8 237 aaKnown RBP23.06■■□□□ 1.28
CAPN1-222ENST00000532285 PPIL1Q9Y3C6 166 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 MSRB2Q9Y3D2 182 aa23.06■■□□□ 1.28
CAPN1-222ENST00000532285 PPP1R12AO14974 1030 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-222ENST00000532285 ZRANB2O95218 330 aaKnown RBP eCLIP23.05■■□□□ 1.28
CAPN1-222ENST00000532285 JCHAINP01591 159 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 HLA-DQB2P05538 268 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 C1SP09871 688 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 JUNDP17535 347 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 CA4P22748 312 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 NR2C2P49116 596 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 DYNLT1P63172 113 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 IFI35P80217 286 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-222ENST00000532285 AP1B1Q10567 949 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 ACOX1Q15067 660 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 NPNTQ6UXI9 565 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 SPOCD1Q6ZMY3 1216 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 USP45Q70EL2 814 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 BZW1Q7L1Q6 419 aaKnown RBP23.05■■□□□ 1.28
CAPN1-222ENST00000532285 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.05■■□□□ 1.28
CAPN1-222ENST00000532285 SPC24Q8NBT2 197 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 ARRDC2Q8TBH0 407 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 BTN2A2Q8WVV5 523 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 PIH1D2Q8WWB5 315 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 OLFM3Q96PB7 478 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 IL12RB2Q99665 862 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 APOOQ9BUR5 198 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 KCTD5Q9NXV2 234 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 PCDHGA1Q9Y5H4 931 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 CSNK1G3Q9Y6M4 447 aa23.05■■□□□ 1.28
CAPN1-222ENST00000532285 LRP4O75096 1905 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 PLXNB3Q9ULL4 1909 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 AKAP13Q12802 2813 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 KCNK1O00180 336 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 TRIM38O00635 465 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 SCAMP1O15126 338 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 SIGLEC6O43699 453 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 FZD6O60353 706 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 PCCBP05166 539 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 ALPPL2P10696 532 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 CDK4P11802 303 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 CKMT2P17540 419 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 VAV2P52735 878 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 NAP1L1P55209 391 aaKnown RBP23.04■■□□□ 1.28
CAPN1-222ENST00000532285 TFDP3Q5H9I0 405 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 TMEM139Q8IV31 216 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 ZNF548Q8NEK5 533 aaPredicted RBP23.04■■□□□ 1.28
CAPN1-222ENST00000532285 COQ10AQ96MF6 247 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms