RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 ALG9Q9H6U8 611 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 MTRRQ9UBK8 725 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 SLC7A4O43246 635 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 SKAP2O75563 359 aaPredicted RBP15.22■□□□□ 0.03
USP35-204ENST00000530267 LMNAP02545 664 aaKnown RBP15.22■□□□□ 0.03
USP35-204ENST00000530267 LTA4HP09960 611 aaKnown RBP15.22■□□□□ 0.03
USP35-204ENST00000530267 POLD2P49005 469 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 TUFMP49411 452 aaKnown RBP15.22■□□□□ 0.03
USP35-204ENST00000530267 CLCN5P51795 746 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 KLF10Q13118 480 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 SEMA3AQ14563 771 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 PTPRRQ15256 657 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 FSCBQ5H9T9 825 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 AGAP9Q5VTM2 703 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 LINGO4Q6UY18 593 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 DEFB107AQ8IZN7 70 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 NRG4Q8WWG1 115 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 LENG8Q96PV6 779 aaPredicted RBP15.22■□□□□ 0.03
USP35-204ENST00000530267 CFHR5Q9BXR6 569 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 RNF208Q9H0X6 261 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 C1orf21Q9H246 121 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 PACSIN3Q9UKS6 424 aa15.22■□□□□ 0.03
USP35-204ENST00000530267 CCDC162PA2VCL2 907 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 H3BNC9 293 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 STC2O76061 302 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 PAPSS2O95340 614 aaPredicted RBP15.21■□□□□ 0.03
USP35-204ENST00000530267 GLP2RO95838 553 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 MYL4P12829 197 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 COX4I1P13073 169 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 HMGA1P17096 107 aaKnown RBP15.21■□□□□ 0.03
USP35-204ENST00000530267 KCNC1P48547 511 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 OXCT1P55809 520 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 TECRLQ5HYJ1 363 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 PDCD6IPQ8WUM4 868 aaKnown RBP15.21■□□□□ 0.03
USP35-204ENST00000530267 IGSF21Q96ID5 467 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 NCKIPSDQ9NZQ3 722 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 UBA2Q9UBT2 640 aaPredicted RBP15.21■□□□□ 0.03
USP35-204ENST00000530267 SSX2IPQ9Y2D8 614 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 PCDHGC4Q9Y5F7 938 aa15.21■□□□□ 0.03
USP35-204ENST00000530267 CD3EAPO15446 510 aaKnown RBP15.21■□□□□ 0.02
USP35-204ENST00000530267 RHOCP08134 193 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 NAA25Q14CX7 972 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 LCA5Q86VQ0 697 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 HIPK4Q8NE63 616 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 GABPB2Q8TAK5 448 aaPredicted RBP15.21■□□□□ 0.02
USP35-204ENST00000530267 FEM1CQ96JP0 617 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 MUC3BQ9H195 1237 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 MAGEH1Q9H213 219 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 CWH43Q9H720 699 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 TNFRSF12AQ9NP84 129 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 TRPM5Q9NZQ8 1165 aa15.21■□□□□ 0.02
USP35-204ENST00000530267 CDH23Q9H251 3354 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 A8MT66 165 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 AIM2O14862 343 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 FGF1P05230 155 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 PDHA1P08559 390 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 SPATA31D3P0C874 917 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 ATP5F1P24539 256 aaPredicted RBP15.2■□□□□ 0.02
USP35-204ENST00000530267 CDH4P55283 916 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 C6orf163Q5TEZ5 329 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 KLC3Q6P597 504 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 SPATA31D4Q6ZUB0 917 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 NET1Q7Z628 596 aaPredicted RBP15.2■□□□□ 0.02
USP35-204ENST00000530267 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.2■□□□□ 0.02
USP35-204ENST00000530267 TRPC7Q9HCX4 862 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 COMMD8Q9NX08 183 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.2■□□□□ 0.02
USP35-204ENST00000530267 AGO1Q9UL18 857 aaKnown RBP15.2■□□□□ 0.02
USP35-204ENST00000530267 CDYLQ9Y232 598 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 SPO11Q9Y5K1 396 aa15.2■□□□□ 0.02
USP35-204ENST00000530267 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.19■□□□□ 0.02
USP35-204ENST00000530267 HLA-DPA1P20036 260 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 ITGAXP20702 1163 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 PMLP29590 882 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 ASPHQ12797 758 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 ZNF177Q13360 481 aaPredicted RBP15.19■□□□□ 0.02
USP35-204ENST00000530267 MUM1Q2TAK8 710 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 TRIM60Q495X7 471 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 TCHHL1Q5QJ38 904 aaPredicted RBP15.19■□□□□ 0.02
USP35-204ENST00000530267 ZNF549Q6P9A3 640 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 ACAD11Q709F0 780 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 SNX32Q86XE0 403 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 KDM1BQ8NB78 822 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 BRSK1Q8TDC3 778 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 SCG3Q8WXD2 468 aaKnown RBP15.19■□□□□ 0.02
USP35-204ENST00000530267 TSPAN17Q96FV3 270 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 TTC1Q99614 292 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 STOML1Q9UBI4 398 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 SEPT3Q9UH03 358 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 UBA6A0AVT1 1052 aaPredicted RBP15.19■□□□□ 0.02
USP35-204ENST00000530267 SNAP91O60641 907 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 IPO13O94829 963 aaKnown RBP15.19■□□□□ 0.02
USP35-204ENST00000530267 BAG2O95816 211 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 ALDH1A3P47895 512 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 KPNA2P52292 529 aaKnown RBP15.19■□□□□ 0.02
USP35-204ENST00000530267 PRKAA2P54646 552 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 TLE2Q04725 743 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 TNK2Q07912 1038 aa15.19■□□□□ 0.02
USP35-204ENST00000530267 RNF219Q5W0B1 726 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms