RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 PGBD5Q8N414 524 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 PCDH19Q8TAB3 1148 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 BTN2A2Q8WVV5 523 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 RFFLQ8WZ73 363 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 FAF2Q96CS3 445 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 CCDC86Q9H6F5 360 aaKnown RBP13.16□□□□□ -0.3
SSH3-206ENST00000529224 NOD2Q9HC29 1040 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 MBNL1Q9NR56 388 aaKnown RBP13.16□□□□□ -0.3
SSH3-206ENST00000529224 EVA1BQ9NVM1 165 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 HAUS2Q9NVX0 235 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 NLGN3Q9NZ94 848 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 CSNK1G3Q9Y6M4 447 aa13.16□□□□□ -0.3
SSH3-206ENST00000529224 FASNP49327 2511 aaKnown RBP13.16□□□□□ -0.3
SSH3-206ENST00000529224 TTC24A2A3L6 582 aaPredicted RBP13.15□□□□□ -0.3
SSH3-206ENST00000529224 PRKCGP05129 697 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 ELFN1P0C7U0 828 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 MX2P20592 715 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 KDELR1P24390 212 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 PEX5P50542 639 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 CLDN6P56747 220 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 DAB2P98082 770 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 RALGDSQ12967 914 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 EIF2B5Q13144 721 aaKnown RBP13.15□□□□□ -0.3
SSH3-206ENST00000529224 IFI16Q16666 785 aaKnown RBP13.15□□□□□ -0.3
SSH3-206ENST00000529224 TPRG1LQ5T0D9 272 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 LIPIQ6XZB0 460 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 KDM7AQ6ZMT4 941 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 VSIG1Q86XK7 387 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 TEX26Q8N6G2 289 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 ZNF548Q8NEK5 533 aaPredicted RBP13.15□□□□□ -0.3
SSH3-206ENST00000529224 PDCD6IPQ8WUM4 868 aaKnown RBP13.15□□□□□ -0.3
SSH3-206ENST00000529224 MAML1Q92585 1016 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 FATE1Q969F0 183 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 TBATAQ96M53 351 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 NSMCE3Q96MG7 304 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 TSGA13Q96PP4 275 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 SLC13A1Q9BZW2 595 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 NT5MQ9NPB1 228 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 GPSM3Q9Y4H4 160 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 PCDHGC4Q9Y5F7 938 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 LOC400499M0QZD8 3231 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 IGSF10Q6WRI0 2623 aa13.15□□□□□ -0.3
SSH3-206ENST00000529224 TRABD2BA6NFA1 517 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 K7ESM1 405 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 AQP9O43315 295 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 NEBLO76041 1014 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 CPP00450 1065 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 GIMD1P0DJR0 217 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 CCNCP24863 283 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 HTR1BP28222 390 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 HNF1BP35680 557 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 SLC1A1P43005 524 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 DUSP3P51452 185 aaPredicted RBP13.14□□□□□ -0.31
SSH3-206ENST00000529224 MAXP61244 160 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 SEMG2Q02383 582 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 MTM1Q13496 603 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 INPP5AQ14642 412 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 ODF2Q5BJF6 829 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 FAXCQ5TGI0 409 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 PHACTR4Q8IZ21 702 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 TC2NQ8N9U0 490 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 FAM181AQ8N9Y4 354 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 ATL2Q8NHH9 583 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 LMX1AQ8TE12 382 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 RAPGEF5Q92565 580 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 ZNF830Q96NB3 372 aaPredicted RBP13.14□□□□□ -0.31
SSH3-206ENST00000529224 RNF157Q96PX1 679 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 CAAP1Q9H8G2 361 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 USP29Q9HBJ7 922 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 APOBEC3BQ9UH17 382 aaKnown RBP13.14□□□□□ -0.31
SSH3-206ENST00000529224 AMACRQ9UHK6 382 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 KLF15Q9UIH9 416 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 PHTF1Q9UMS5 762 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 RAXQ9Y2V3 346 aa13.14□□□□□ -0.31
SSH3-206ENST00000529224 LRRD1A4D1F6 860 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 TPP1O14773 563 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 MATN3O15232 486 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 RECQL5O94762 991 aaPredicted RBP13.13□□□□□ -0.31
SSH3-206ENST00000529224 PGLSO95336 258 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 MAP3K6O95382 1288 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 PCCBP05166 539 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 CYP2A6P11509 494 aaPredicted RBP13.13□□□□□ -0.31
SSH3-206ENST00000529224 CKMT1AP12532 417 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 KRT10P13645 584 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 JUPP14923 745 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 CES1P23141 567 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 VIPR1P32241 457 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 BLKP51451 505 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 E2F1Q01094 437 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 PPARDQ03181 441 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 GBE1Q04446 702 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 ITKQ08881 620 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 TRAF2Q12933 501 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 NFATC4Q14934 902 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 TCEAL1Q15170 157 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 PRRT3Q5FWE3 981 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms