RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PHTF1Q9UMS5 762 aa24.83■■□□□ 1.56
LDLRAD3-203ENST00000528989 NPIPB15A6NHN6 443 aaPredicted RBP24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 AP3B1O00203 1094 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 MID1O15344 667 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 SLC4A1P02730 911 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 GPX6P59796 221 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 RPL26P61254 145 aaKnown RBP24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 CST6Q15828 149 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 CRY1Q16526 586 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 EOGTQ5NDL2 527 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 DSG4Q86SJ6 1040 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 TMPRSS6Q8IU80 811 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 UHMK1Q8TAS1 419 aaKnown RBP24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 ANKRD7Q92527 254 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 ZBTB9Q96C00 473 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 EID2BQ96D98 161 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 PHACTR1Q9C0D0 580 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 ARGLU1Q9NWB6 273 aaPredicted RBP24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 RPL26L1Q9UNX3 145 aaKnown RBP24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 CKAP5Q14008 2032 aa24.82■■□□□ 1.56
LDLRAD3-203ENST00000528989 LDB2O43679 373 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 PDGFBP01127 241 aaPredicted RBP24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 SMAD1Q15797 465 aaKnown RBP24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 PCID2Q5JVF3 399 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 TSPAN33Q86UF1 283 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 SPOCK2Q92563 424 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 LRRC39Q96DD0 335 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 SCRN2Q96FV2 425 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 FCRL3Q96P31 734 aaPredicted RBP24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 NELL2Q99435 816 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 ARFGAP3Q9NP61 516 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 SAMD15Q9P1V8 674 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 DKK3Q9UBP4 350 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 SLC2A6Q9UGQ3 507 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 TSPAN11A1L157 253 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 ITGB7P26010 798 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 NMBRP28336 390 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 RPS14P62263 151 aaKnown RBP24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 FAM193AP78312 1265 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 LRRC32Q14392 662 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 UNC5AQ6ZN44 842 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 PALM2Q8IXS6 379 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 UNC5BQ8IZJ1 945 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 AADATQ8N5Z0 425 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 PJA1Q8NG27 643 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 BRSK1Q8TDC3 778 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 UBLCP1Q8WVY7 318 aaPredicted RBP24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 UHRF1Q96T88 793 aaPredicted RBP24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 PCDH12Q9NPG4 1184 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 IL1RAPL1Q9NZN1 696 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 SERGEFQ9UGK8 458 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 PPIL1Q9Y3C6 166 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 TCAF1Q9Y4C2 921 aa24.81■■□□□ 1.56
LDLRAD3-203ENST00000528989 RNASEH1O60930 286 aaKnown RBP24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 PIAS1O75925 651 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 TTC4O95801 387 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 ADRA1DP25100 572 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 HSD17B3P37058 310 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 POLR2LP62875 67 aaKnown RBP24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 CDKN3Q16667 212 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 C3orf62Q6ZUJ4 267 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 LYSMD3Q7Z3D4 306 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 SYNPOQ8N3V7 929 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 KIFC1Q9BW19 673 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 MAGEE1Q9HCI5 957 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 GGT7Q9UJ14 662 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 SOX13Q9UN79 622 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 ITM2BQ9Y287 266 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 RPS6KL1Q9Y6S9 549 aa24.8■■□□□ 1.56
LDLRAD3-203ENST00000528989 GOLGA8CPA6NN73 597 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 C1QTNF3-AMACRE9PGA6 284 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 RIPK2O43353 540 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 DCNP07585 359 aaKnown RBP24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 DRD3P35462 400 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 CNTN1Q12860 1018 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 HSF5Q4G112 596 aaPredicted RBP24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 GLT6D1Q7Z4J2 308 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 PABPC3Q9H361 631 aaKnown RBP24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 B4GALT6Q9UBX8 382 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 MROH6A6NGR9 719 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 CAPN8A6NHC0 703 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 UPK3BL1B0FP48 263 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 UPK3BL2E5RIL1 263 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 CCL22O00626 93 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 CLDN7O95471 211 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 LHCGRP22888 699 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 SLC29A2Q14542 456 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 FAM46CQ5VWP2 391 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 ZNF776Q68DI1 518 aaPredicted RBP24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 ESRP1Q6NXG1 681 aaKnown RBP24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 FBXL19Q6PCT2 694 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 CRTC1Q6UUV9 634 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 CEP128Q6ZU80 1094 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 TMEM135Q86UB9 458 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 PPHLN1Q8NEY8 458 aaKnown RBP24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 HCAR2Q8TDS4 363 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 MRGPRX1Q96LB2 322 aa24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 MCCC1Q96RQ3 725 aaPredicted RBP24.79■■□□□ 1.56
LDLRAD3-203ENST00000528989 BDP1A6H8Y1 2624 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms