RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OR6C4Q8NGE1 309 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 OR2AP1Q8NGE2 309 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 RAB7BQ96AH8 199 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 NAP1L5Q96NT1 182 aaPredicted RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 MCEEQ96PE7 176 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 PSMG3-AS1Q96PY0 264 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 EIF3CQ99613 913 aaKnown RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 MAGEB5Q9BZ81 275 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CATSPERBQ9H7T0 1116 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 PARVAQ9NVD7 372 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 HECAQ9UBI9 543 aaPredicted RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 TUBD1Q9UJT1 453 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 FCF1Q9Y324 198 aaKnown RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 LOXL2Q9Y4K0 774 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 FADS3Q9Y5Q0 445 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 PRAMEF33A0A0G2JMD5 474 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 LRRC53A6NM62 1247 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 NEMP1O14524 444 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 FGF10O15520 208 aaPredicted RBP10.63□□□□□ -0.71
CPSF1-203ENST00000527916 SPINT1O43278 529 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 TSPAN6O43657 245 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 PRAMEF10O60809 474 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 RPLP0P05388 317 aaKnown RBP10.63□□□□□ -0.71
CPSF1-203ENST00000527916 ALPIP09923 528 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 BLKP51451 505 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 PFN3P60673 137 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 CCL7P80098 99 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 KCNAB2Q13303 367 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 FGL2Q14314 439 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 ELOCQ15369 112 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 IGFBP7Q16270 282 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 ASIC2Q16515 512 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 SKIDA1Q1XH10 827 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 PARP15Q460N3 678 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 ZNF805Q5CZA5 627 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 TMEM164Q5U3C3 297 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 LVRNQ6Q4G3 990 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 PYROXD2Q8N2H3 581 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 SDR16C5Q8N3Y7 309 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 FSTL5Q8N475 847 aaPredicted RBP10.63□□□□□ -0.71
CPSF1-203ENST00000527916 FNIP1Q8TF40 1166 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 ASB12Q8WXK4 309 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 CCDC74AQ96AQ1 378 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 CMKLR1Q99788 373 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 EPAS1Q99814 870 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 NCAPGQ9BPX3 1015 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 LRRC61Q9BV99 259 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 C1QTNF2Q9BXJ5 285 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 OSBPL1AQ9BXW6 950 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 CPEB1Q9BZB8 566 aaKnown RBP10.63□□□□□ -0.71
CPSF1-203ENST00000527916 TTYH3Q9C0H2 523 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 HAUS4Q9H6D7 363 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 NOL6Q9H6R4 1146 aaKnown RBP10.63□□□□□ -0.71
CPSF1-203ENST00000527916 TAS2R14Q9NYV8 317 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 MFHAS1Q9Y4C4 1052 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 SCN8AQ9UQD0 1980 aa10.63□□□□□ -0.71
CPSF1-203ENST00000527916 TMEM191CA6NGB0 347 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 IGLON5A6NGN9 336 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 CASC3O15234 703 aaKnown RBP10.62□□□□□ -0.71
CPSF1-203ENST00000527916 RNF8O76064 485 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 FTLP02792 175 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-203ENST00000527916 TSHRP16473 764 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 CCR10P46092 362 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 DNA2P51530 1060 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 NDST2P52849 883 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 POLE2P56282 527 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 YPEL5P62699 121 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 OGDHQ02218 1023 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 PPARDQ03181 441 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 RAD51Q06609 339 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 KLHL40Q2TBA0 621 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 MYLK3Q32MK0 819 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 TPRG1LQ5T0D9 272 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 ZNF571Q7Z3V5 609 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-203ENST00000527916 ZFAND4Q86XD8 727 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 DTX1Q86Y01 620 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 PSTKQ8IV42 348 aaKnown RBP10.62□□□□□ -0.71
CPSF1-203ENST00000527916 KYQ8NBH2 561 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 HCAR2Q8TDS4 363 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 HTR3CQ8WXA8 447 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 SYN2Q92777 582 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-203ENST00000527916 USP7Q93009 1102 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 VOPP1Q96AW1 172 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 ARHGEF26Q96DR7 871 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 KLF6Q99612 283 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-203ENST00000527916 C1QTNF7Q9BXJ2 289 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 B3GNT4Q9C0J1 378 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 ISCUQ9H1K1 167 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 TCEAL2Q9H3H9 227 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-203ENST00000527916 LRRN3Q9H3W5 708 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 AKAP7Q9P0M2 348 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-203ENST00000527916 SIRPGQ9P1W8 387 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 ACTL7AQ9Y615 435 aa10.62□□□□□ -0.71
CPSF1-203ENST00000527916 ZFC3H1O60293 1989 aaKnown RBP10.61□□□□□ -0.71
CPSF1-203ENST00000527916 PRRC2CQ9Y520 2896 aaKnown RBP10.61□□□□□ -0.71
CPSF1-203ENST00000527916 CACNA1DQ01668 2161 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 A0A1W2PQJ5 194 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 A0A1W2PQM1 296 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 BLACEA4D250 179 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 C16orf96A6NNT2 1141 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms