RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 TBC1D3Q8IZP1 549 aaPredicted RBP16.72■□□□□ 0.27
SMCO4-204ENST00000527149 LPCAT1Q8NF37 534 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 SCRN2Q96FV2 425 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 LYSMD1Q96S90 227 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 MYLKQ15746 1914 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 BPTFQ12830 3046 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 DNAH14Q0VDD8 3507 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 RALGAPA1Q6GYQ0 2036 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 ANXA9O76027 345 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 NDST3O95803 873 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 EPOP01588 193 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 ALPIP09923 528 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 CTPS1P17812 591 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 RPL22P35268 128 aaKnown RBP16.71■□□□□ 0.27
SMCO4-204ENST00000527149 CHRNA4P43681 627 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 GEMP55040 296 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 RPS21P63220 83 aaKnown RBP16.71■□□□□ 0.27
SMCO4-204ENST00000527149 OLIG2Q13516 323 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 CNGA3Q16281 694 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 CDKN3Q16667 212 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 FAXCQ5TGI0 409 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 ERAP2Q6P179 960 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 TSPAN33Q86UF1 283 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 IPMKQ8NFU5 416 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 WRAP53Q9BUR4 548 aaKnown RBP16.71■□□□□ 0.27
SMCO4-204ENST00000527149 C1QTNF2Q9BXJ5 285 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 DDX47Q9H0S4 455 aaKnown RBP16.71■□□□□ 0.27
SMCO4-204ENST00000527149 TMEM74BQ9NUR3 256 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 RNF14Q9UBS8 474 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 PILRBQ9UKJ0 227 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 TPX2Q9ULW0 747 aaKnown RBP16.71■□□□□ 0.27
SMCO4-204ENST00000527149 PCDH15Q96QU1 1955 aa16.71■□□□□ 0.27
SMCO4-204ENST00000527149 ATXN2Q99700 1313 aaKnown RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 DMXL1Q9Y485 3027 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 TP53BP1Q12888 1972 aaPredicted RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 GOLGA6L10A0A0M3HER8 536 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 A0A0U1RQS6 177 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 A0A1W2PPC4 97 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 IGLON5A6NGN9 336 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 MEI4A8MW99 385 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 ANKRD66B4E2M5 251 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 HEXIM1O94992 359 aaKnown RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 PCDH8O95206 1070 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 LMNAP02545 664 aaKnown RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 C6P13671 934 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 XPAP23025 273 aaPredicted RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 CD27P26842 260 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 MAOBP27338 520 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 MAT2AP31153 395 aaKnown RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 VIPR1P32241 457 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 HNF1BP35680 557 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 FAM193AP78312 1265 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 SEMA5AQ13591 1074 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 CCDC137Q6PK04 289 aaKnown RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 RANBP10Q6VN20 620 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 LIPIQ6XZB0 460 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 USP45Q70EL2 814 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 CYP2U1Q7Z449 544 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 KDELC2Q7Z4H8 507 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 CBARPQ8N350 705 aaPredicted RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 CCDC89Q8N998 374 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 TMEM145Q8NBT3 493 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 ATL2Q8NHH9 583 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 PAK5Q9P286 719 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 EIF2B4Q9UI10 523 aaKnown RBP16.7■□□□□ 0.26
SMCO4-204ENST00000527149 RAB23Q9ULC3 237 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 PCDHGA5Q9Y5G8 931 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 CEP250Q9BV73 2442 aa16.7■□□□□ 0.26
SMCO4-204ENST00000527149 KIF2AO00139 706 aaPredicted RBP16.69■□□□□ 0.26
SMCO4-204ENST00000527149 NEMP1O14524 444 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 WNT9AO14904 365 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 RAD51BO15315 384 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 MMP20O60882 483 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 RETP07949 1114 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 HOXD12P35452 270 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 NUDT1P36639 197 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 LIG3P49916 1009 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 CREB5Q02930 508 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 SLC1A5Q15758 541 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 SIRPB2Q5JXA9 342 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 WDR45BQ5MNZ6 344 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 PLA2G2CQ5R387 149 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 DENND5AQ6IQ26 1287 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 CRTC1Q6UUV9 634 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 ASCL5Q7RTU5 278 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 ZNF572Q7Z3I7 529 aaPredicted RBP16.69■□□□□ 0.26
SMCO4-204ENST00000527149 TAB3Q8N5C8 712 aaPredicted RBP16.69■□□□□ 0.26
SMCO4-204ENST00000527149 PAF1Q8N7H5 531 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 CXorf40AQ8TE69 158 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 ASB12Q8WXK4 309 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 SNX19Q92543 992 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 KLK6Q92876 244 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 SLCO2A1Q92959 643 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 IFT43Q96FT9 208 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 PPP1R2P1Q96PQ5 205 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 KLF6Q99612 283 aaPredicted RBP16.69■□□□□ 0.26
SMCO4-204ENST00000527149 FICDQ9BVA6 458 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 ADGRE3Q9BY15 652 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 ETNK1Q9HBU6 452 aa16.69■□□□□ 0.26
SMCO4-204ENST00000527149 PCYOX1Q9UHG3 505 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms