RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 ZNF165P49910 485 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 HDAC4P56524 1084 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 GEMIN4P57678 1058 aaKnown RBP6.62□□□□□ -1.35
CD44-221ENST00000526000 POLR2FP61218 127 aaKnown RBP6.62□□□□□ -1.35
CD44-221ENST00000526000 BIRC2Q13490 618 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 C16orf72Q14CZ0 275 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 ACOX1Q15067 660 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 PTPRRQ15256 657 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 UGP2Q16851 508 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 MIIPQ5JXC2 388 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 MANEALQ5VSG8 457 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 BNIPLQ7Z465 357 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 SLFN11Q7Z7L1 901 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 PLPP6Q8IY26 295 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 ZSCAN1Q8NBB4 408 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 MSANTD4Q8NCY6 345 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 GPR156Q8NFN8 814 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 WDR48Q8TAF3 677 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 PATE1Q8WXA2 126 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 PMEPA1Q969W9 287 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 WDR92Q96MX6 357 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 SELENOOQ9BVL4 669 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 OSBPL1AQ9BXW6 950 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 STK33Q9BYT3 514 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 VPS16Q9H269 839 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 TSPY26PQ9H489 355 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 ZNF71Q9NQZ8 489 aaPredicted RBP6.62□□□□□ -1.35
CD44-221ENST00000526000 STARD5Q9NSY2 213 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 SPATS2LQ9NUQ6 558 aaKnown RBP6.62□□□□□ -1.35
CD44-221ENST00000526000 GOLGA6AQ9NYA3 693 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 SEPT10Q9P0V9 454 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 PLEKHM1Q9Y4G2 1056 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 PCDHGA7Q9Y5G6 932 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 PCDHGA4Q9Y5G9 962 aa6.62□□□□□ -1.35
CD44-221ENST00000526000 HECTD1Q9ULT8 2610 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 C2CD4BA6NLJ0 364 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 RHPN2P1A8MT19 583 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 TMX2-CTNND1H3BSU7 103 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 CACNB4O00305 520 aaPredicted RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 NVLO15381 856 aaKnown RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 SUV39H1O43463 412 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 FUCA1P04066 466 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 CYP1A1P04798 512 aaPredicted RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 TPM2P07951 284 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 LIPCP11150 499 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 GLB1P16278 677 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 GPD1P21695 349 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 SCNN1AP37088 669 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 POLD2P49005 469 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 PEX5P50542 639 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 PAPOLAP51003 745 aaKnown RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 B4GALNT1Q00973 533 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 FMO1Q01740 532 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 TLE1Q04724 770 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 ZFP36L1Q07352 338 aaKnown RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 ELP6Q0PNE2 266 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 MAP9Q49MG5 647 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 ANO6Q4KMQ2 910 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 C14orf28Q4W4Y0 310 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 SNAP47Q5SQN1 464 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 SPECC1LQ69YQ0 1117 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 ERAP2Q6P179 960 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 OGFOD3Q6PK18 319 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 DOK6Q6PKX4 331 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 LVRNQ6Q4G3 990 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 ZNF574Q6ZN55 896 aaPredicted RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 ARHGAP36Q6ZRI8 547 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 SPRED1Q7Z699 444 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 SRLQ86TD4 932 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 PIM3Q86V86 326 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 ZNF761Q86XN6 746 aaPredicted RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 DNAAF5Q86Y56 855 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 TP53INP2Q8IXH6 220 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 RTL3Q8N8U3 475 aaKnown RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 TSEN2Q8NCE0 465 aaKnown RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 OR56A4Q8NGH8 313 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 EPS8L1Q8TE68 723 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 PTCD2Q8WV60 388 aaKnown RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 NSMCE3Q96MG7 304 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 PCMTD1Q96MG8 357 aaPredicted RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 CMKLR1Q99788 373 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 NUDT22Q9BRQ3 303 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 NAA15Q9BXJ9 866 aaKnown RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 SLC39A8Q9C0K1 460 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 CARS2Q9HA77 564 aaKnown RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 FGF22Q9HCT0 170 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 FAM207AQ9NSI2 230 aaPredicted RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 ADAM22Q9P0K1 906 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 DKK3Q9UBP4 350 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 UBA2Q9UBT2 640 aaPredicted RBP6.61□□□□□ -1.35
CD44-221ENST00000526000 NEU3Q9UQ49 428 aa6.61□□□□□ -1.35
CD44-221ENST00000526000 SPTA1P02549 2419 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 ZSCAN5CA6NGD5 496 aaPredicted RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 LRRC10BA6NIK2 292 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 TMCO5BA8MYB1 307 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 F8VZ95 297 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 GOLGA6L19H0YKK7 550 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 DFFAO00273 331 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 TERTO14746 1132 aaKnown RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 EPHB6O15197 1021 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms