RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 PRPSAP1Q14558 356 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 IZUMO3Q5VZ72 239 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 LYSMD3Q7Z3D4 306 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 GSPT2Q8IYD1 628 aaKnown RBP13.16□□□□□ -0.3
SWAP70-203ENST00000524817 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 TMIEQ8NEW7 156 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 NCKAP1Q9Y2A7 1128 aa13.16□□□□□ -0.3
SWAP70-203ENST00000524817 A0A1W2PQU0 124 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 CFAP69A5D8W1 941 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 CCDC188H7C350 402 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 HEXIM1O94992 359 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 DHPSP49366 369 aaPredicted RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 CLDN2P57739 230 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 ZNF33AQ06730 810 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 SLC1A5Q15758 541 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 LRRC66Q68CR7 880 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 PPP1R21Q6ZMI0 780 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 CEP68Q76N32 757 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 KBTBD6Q86V97 674 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 SCAMP4Q969E2 229 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 HSPA12BQ96MM6 686 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 C1QTNF1Q9BXJ1 281 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 CPEB1Q9BZB8 566 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 RNF14Q9UBS8 474 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 PCYOX1Q9UHG3 505 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 TDRD6O60522 2096 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 GOLGA8KD6RF30 607 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 RIOK3O14730 519 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 ATXN1LP0C7T5 689 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 ITGB7P26010 798 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 ETV3P41162 512 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 TNNT3P45378 269 aaPredicted RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 LIG3P49916 1009 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 ITGA8P53708 1063 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 PLTPP55058 493 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 Q6ZVL8 140 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 RASSF3Q86WH2 238 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 PPP1R16AQ96I34 528 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 TBL1YQ9BQ87 522 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 EPB41L5Q9HCM4 733 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 EIF2B4Q9UI10 523 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 ZFR2Q9UPR6 939 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 UPK3BL1B0FP48 263 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 UPK3BL2E5RIL1 263 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 HTRA2O43464 458 aaPredicted RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 NDUFS2O75306 463 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 RPP40O75818 363 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 SEMA4FO95754 770 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 ADH1BP00325 375 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 HSPA9P38646 679 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
SWAP70-203ENST00000524817 CCDC70Q6NSX1 233 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 CASC4Q6P4E1 433 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 CCDC25Q86WR0 208 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 GRK7Q8WTQ7 553 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 RTP4Q96DX8 246 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 TRIB3Q96RU7 358 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
SWAP70-203ENST00000524817 SPTBN2O15020 2390 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 FZD6O60353 706 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 ANXA9O76027 345 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 ITPKAP23677 461 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 IVDP26440 423 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 GEMP55040 296 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 FGL2Q14314 439 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 ACOX1Q15067 660 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 HSF5Q4G112 596 aaPredicted RBP13.14□□□□□ -0.31
SWAP70-203ENST00000524817 DENND5AQ6IQ26 1287 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 CRTC1Q6UUV9 634 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 HSD11B1LQ7Z5J1 315 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 SPNS2Q8IVW8 549 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 CAMKK1Q8N5S9 505 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 OR13C4Q8NGS5 318 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 BIRC7Q96CA5 298 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 WSB2Q9NYS7 404 aaPredicted RBP13.14□□□□□ -0.31
SWAP70-203ENST00000524817 FADS3Q9Y5Q0 445 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 A0A0J9YYE9 177 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.14□□□□□ -0.31
SWAP70-203ENST00000524817 K7ESM1 405 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 RNGTTO60942 597 aaKnown RBP13.14□□□□□ -0.31
SWAP70-203ENST00000524817 TRBC1P01850 177 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 PRSS56P0CW18 603 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 MGAT1P26572 445 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 CD6P30203 668 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 TCF15Q12870 199 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 ALG1LQ6GMV1 187 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 SLC41A1Q8IVJ1 513 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 UBE2Q2Q8WVN8 375 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 ECHDC3Q96DC8 303 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 FRMD8P1Q9BZ68 369 aaPredicted RBP13.14□□□□□ -0.31
SWAP70-203ENST00000524817 GPR63Q9BZJ6 419 aa13.14□□□□□ -0.31
SWAP70-203ENST00000524817 PRMT8Q9NR22 394 aaPredicted RBP13.14□□□□□ -0.31
SWAP70-203ENST00000524817 GOLGA4Q13439 2230 aaKnown RBP13.14□□□□□ -0.31
SWAP70-203ENST00000524817 RAD51BO15315 384 aa13.13□□□□□ -0.31
SWAP70-203ENST00000524817 LZTS3O60299 673 aaPredicted RBP13.13□□□□□ -0.31
SWAP70-203ENST00000524817 ELFN1P0C7U0 828 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms