RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 EIF3CLB5ME19 914 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 VWA5AO00534 786 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 SPRY3O43610 288 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 PTP4A3O75365 173 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 RNASEH2AO75792 299 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 MTA2O94776 668 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 RGS11O94810 467 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 NDUFB4O95168 129 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 MLYCDO95822 493 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 CRYABP02511 175 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 SHMT1P34896 483 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 PBX3P40426 434 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 MLH1P40692 756 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 RFX5P48382 616 aaPredicted RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 PIP4K2AP48426 406 aaPredicted RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 ROR2Q01974 943 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 GOLGA8DPQ0D2H9 430 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 CSTF3Q12996 717 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 OLIG2Q13516 323 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 SGO1Q5FBB7 561 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 DNTTIP2Q5QJE6 756 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 DAB2IPQ5VWQ8 1189 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 CYP20A1Q6UW02 462 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 LCTLQ6UWM7 567 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 GSTA5Q7RTV2 222 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 ZCCHC9Q8N567 271 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 FRMD1Q8N878 549 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 BEST2Q8NFU1 509 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 ARHGEF2Q92974 986 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 SLITRK1Q96PX8 696 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 KRTAP1-5Q9BYS1 174 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 CLK4Q9HAZ1 481 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 FBRSL1Q9HCM7 1045 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 BPIFA1Q9NP55 256 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 DDX4Q9NQI0 724 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 PLK2Q9NYY3 685 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 EHD2Q9NZN4 543 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 IL36RNQ9UBH0 155 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 ADAM18Q9Y3Q7 739 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 NFE2L3Q9Y4A8 694 aa3.94□□□□□ -1.78
PCM1-220ENST00000523896 LSM4Q9Y4Z0 139 aaKnown RBP3.94□□□□□ -1.78
PCM1-220ENST00000523896 ANKRD18BA2A2Z9 1011 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 BECN2A8MW95 431 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 KDM4EB2RXH2 506 aaPredicted RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 SNAP23O00161 211 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 TNFRSF13BO14836 293 aaPredicted RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 WNT9BO14905 357 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 RGS14O43566 566 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 EIF2S1P05198 315 aaKnown RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 CD58P19256 250 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 CDC25AP30304 524 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 TM4SF1P30408 202 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 MAPK4P31152 587 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 CCKBRP32239 447 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 KCNJ4P48050 445 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 CLNS1AP54105 237 aaKnown RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 CEBPZQ03701 1054 aaKnown RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 ITGADQ13349 1161 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 MYBPC2Q14324 1141 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 FRG1Q14331 258 aaKnown RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 HNF4GQ14541 408 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 DRAP1Q14919 205 aaPredicted RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 USP41Q3LFD5 358 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 SLC45A4Q5BKX6 768 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 WDR78Q5VTH9 848 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 RUSC1-AS1Q66K80 236 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 KIAA1161Q6NSJ0 714 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 TSSK4Q6SA08 328 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 KLHL24Q6TFL4 600 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 QSOX2Q6ZRP7 698 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 LINGO2Q7L985 606 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 ARHGAP12Q8IWW6 846 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 SLC35F3Q8IY50 421 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 HUS1BQ8NHY5 278 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 USP6NLQ92738 828 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 MMABQ96EY8 250 aaPredicted RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 TIGD1Q96MW7 591 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 FAM110AQ9BQ89 295 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 TKTL2Q9H0I9 626 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 RBM38Q9H0Z9 239 aaKnown RBP3.93□□□□□ -1.78
PCM1-220ENST00000523896 KIF9Q9HAQ2 790 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 TMEM51Q9NW97 253 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 HCFC1R1Q9NWW0 138 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 DLGAP2Q9P1A6 1054 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 FZD10Q9ULW2 581 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 LYVE1Q9Y5Y7 322 aa3.93□□□□□ -1.78
PCM1-220ENST00000523896 FAM237BA0A1B0GVD1 139 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 FSD2A1L4K1 749 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 GTPBP1O00178 669 aaKnown RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 ITM2AO43736 263 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 IPO7O95373 1038 aaKnown RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 NAGAP17050 411 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 GPTP24298 496 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 NFKBIAP25963 317 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 CCKARP32238 428 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 NUDT6P53370 316 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 PGGT1BP53609 377 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 PMS2P54278 862 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 DRG2P55039 364 aaKnown RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 KRTAP10-9P60411 292 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms