RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 FAM35AQ86V20 835 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 CPNE9Q8IYJ1 553 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 CPSF7Q8N684 471 aaKnown RBP9.07□□□□□ -0.96
CSMD1-212ENST00000523387 PNPT1Q8TCS8 783 aaKnown RBP9.07□□□□□ -0.96
CSMD1-212ENST00000523387 STYXQ8WUJ0 223 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 TFAP2CQ92754 450 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 CORO1BQ9BR76 489 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 NPLQ9BXD5 320 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-212ENST00000523387 C6orf62Q9GZU0 229 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-212ENST00000523387 PCDH12Q9NPG4 1184 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 TMPRSS4Q9NRS4 437 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 KIF17Q9P2E2 1029 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 LIMD1Q9UGP4 676 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 ARFGEF1Q9Y6D6 1849 aa9.07□□□□□ -0.96
CSMD1-212ENST00000523387 NRP1O14786 923 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 FUCA1P04066 466 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 LINC00032P0C843 101 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TRIM32Q13049 653 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 GTF2H3Q13889 308 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 MAPRE1Q15691 268 aaKnown RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 PFKFB4Q16877 469 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 STYK1Q6J9G0 422 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TRNP1Q6NT89 227 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SCIMPQ6UWF3 145 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 STRADAQ7RTN6 431 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SAPCD2Q86UD0 394 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 PTGR2Q8N8N7 351 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ANKFN1Q8N957 763 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TRUB1Q8WWH5 349 aaKnown RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ARNTL2Q8WYA1 636 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 WNT8BQ93098 351 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ROPN1LQ96C74 230 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 GPR22Q99680 433 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ASPSCR1Q9BZE9 553 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TRIM8Q9BZR9 551 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SARS2Q9NP81 518 aaKnown RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 COMMD8Q9NX08 183 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ANGPTL3Q9Y5C1 460 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 PHLPP1O60346 1717 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 NHSQ6T4R5 1651 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ARPC2O15144 300 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SERPINB7O75635 380 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 MYO1DO94832 1006 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SNAP29O95721 258 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 C8BP07358 591 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 THRBP10828 461 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 IDO1P14902 403 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 CD1EP15812 388 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SEPHS1P49903 392 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TKTL1P51854 596 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 DEFA1P59665 94 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 DEFA3P59666 94 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SP2Q02086 613 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 LIPEQ05469 1076 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TIGD2Q4W5G0 525 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 IQSEC1Q6DN90 963 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ESRP1Q6NXG1 681 aaKnown RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 CNSTQ6PJW8 725 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TAS2R42Q7RTR8 314 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 OTOP3Q7RTS5 596 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 PIGZQ86VD9 579 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 CLYBLQ8N0X4 340 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TXNDC5Q8NBS9 432 aaKnown RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TRPV3Q8NET8 790 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 OR52K2Q8NGK3 314 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 EDEM1Q92611 657 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ALG2Q9H553 416 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 C8orf4Q9NR00 106 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 KLK14Q9P0G3 267 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SMCHD1A6NHR9 2005 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TAF4O00268 1085 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SNPHO15079 494 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 SYNCRIPO60506 623 aaKnown RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 AHSGP02765 367 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 MYF6P23409 242 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ELK4P28324 431 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 NOS2P35228 1153 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ADAM17P78536 824 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 FOXD4Q12950 439 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ARMCX6Q7L4S7 300 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 AKAP14Q86UN6 197 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 IFNLR1Q8IU57 520 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 FLAD1Q8NFF5 587 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TBC1D15Q8TC07 691 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 ITPKCQ96DU7 683 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 PABPC5Q96DU9 382 aaKnown RBP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 VAT1Q99536 393 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 HERC2P3Q9BVR0 1158 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 CHID1Q9BWS9 393 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 FTHL17Q9BXU8 183 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 RBM22Q9NW64 420 aaKnown RBP eCLIP9.06□□□□□ -0.96
CSMD1-212ENST00000523387 CRYL1Q9Y2S2 319 aa9.06□□□□□ -0.96
CSMD1-212ENST00000523387 TMEM221A6NGB7 291 aa9.05□□□□□ -0.96
CSMD1-212ENST00000523387 ZNF701M0R085 212 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-212ENST00000523387 ATG7O95352 703 aa9.05□□□□□ -0.96
CSMD1-212ENST00000523387 APBA3O96018 575 aa9.05□□□□□ -0.96
CSMD1-212ENST00000523387 ALOX12P18054 663 aa9.05□□□□□ -0.96
CSMD1-212ENST00000523387 MAGEA3P43357 314 aa9.05□□□□□ -0.96
CSMD1-212ENST00000523387 MAP3K7CLP57077 242 aa9.05□□□□□ -0.96
CSMD1-212ENST00000523387 POU4F1Q01851 419 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms