RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 XBP1P17861 261 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 PIGAP37287 484 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 DLG1Q12959 904 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 ITGADQ13349 1161 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 SNTA1Q13424 505 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 TDGQ13569 410 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 NEDD9Q14511 834 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 OASLQ15646 514 aaKnown RBP4.3□□□□□ -1.72
PTPN12-215ENST00000522115 KRT24Q2M2I5 525 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 WBP2NLQ6ICG8 309 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 MTSS1LQ765P7 747 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 ESX1Q8N693 406 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 NFKBIDQ8NI38 313 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 ST8SIA4Q92187 359 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 BICD1Q96G01 975 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 IGSF21Q96ID5 467 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 ADGRG7Q96K78 797 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 SLITRK1Q96PX8 696 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 SIN3AQ96ST3 1273 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 ESRP2Q9H6T0 727 aaKnown RBP4.3□□□□□ -1.72
PTPN12-215ENST00000522115 MAGEE1Q9HCI5 957 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 MKKSQ9NPJ1 570 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-215ENST00000522115 CISD1Q9NZ45 108 aaKnown RBP4.3□□□□□ -1.72
PTPN12-215ENST00000522115 A4GNTQ9UNA3 340 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 CDC14AQ9UNH5 594 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 FAM96BQ9Y3D0 163 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 STON1Q9Y6Q2 735 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
PTPN12-215ENST00000522115 UTYO14607 1347 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 ATXN2Q99700 1313 aaKnown RBP4.29□□□□□ -1.72
PTPN12-215ENST00000522115 LOC102724159A0A0B4J2E5 919 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 TEX13CA0A0J9YWL9 993 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 PLSCR5A0PG75 271 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 PLEKHD1A6NEE1 506 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 TNFSF14O43557 240 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 NDUFS7O75251 213 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 RFPL2O75678 378 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 ABCD1P33897 745 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 GGT5P36269 586 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 ERVFC1-1P60608 527 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 GRIK3Q13003 919 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 PWP2Q15269 919 aaKnown RBP4.29□□□□□ -1.72
PTPN12-215ENST00000522115 SLC9B1Q4ZJI4 515 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 GORABQ5T7V8 394 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 LRRC8EQ6NSJ5 796 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 ANKRD54Q6NXT1 300 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 RHBDF2Q6PJF5 856 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 NOXA1Q86UR1 476 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 DHX40Q8IX18 779 aaKnown RBP4.29□□□□□ -1.72
PTPN12-215ENST00000522115 RFLNBQ8N5W9 214 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 IL17REQ8NFR9 667 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 MAGEC3Q8TD91 643 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 WFIKKN2Q8TEU8 576 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 KLHL29Q96CT2 875 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 OR1F2PQ96R84 312 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 BBS4Q96RK4 519 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 HEMGNQ9BXL5 484 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 GLIS2Q9BZE0 524 aaPredicted RBP4.29□□□□□ -1.72
PTPN12-215ENST00000522115 SMARCAL1Q9NZC9 954 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 SARDHQ9UL12 918 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 SCINQ9Y6U3 715 aa4.29□□□□□ -1.72
PTPN12-215ENST00000522115 KDM3AQ9Y4C1 1321 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 TMEM202A6NGA9 273 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 TTC36A6NLP5 189 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 LDLRAD4O15165 306 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 KRT36O76013 467 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SRCP12931 536 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 MT3P25713 68 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SSTR2P30874 369 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SHMT1P34896 483 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 EEF1A2Q05639 463 aaKnown RBP4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SLC39A14Q15043 492 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SF3B4Q15427 424 aaKnown RBP eCLIP4.28□□□□□ -1.721e-12■■■■□ 20.5
PTPN12-215ENST00000522115 ATP13A5Q4VNC0 1218 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SLC9C2Q5TAH2 1124 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SLC35F3Q8IY50 421 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 EXOC8Q8IYI6 725 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 MTBPQ96DY7 904 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 KLHL15Q96M94 604 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 NR1H4Q96RI1 486 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SH3GL2Q99962 352 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 FAM110AQ9BQ89 295 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 HAUS8Q9BT25 410 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 AGXT2Q9BYV1 514 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 NUF2Q9BZD4 464 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 C17orf75Q9HAS0 396 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 VEZTQ9HBM0 779 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 PCDH9Q9HC56 1237 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 BPIFA1Q9NP55 256 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 ZNF224Q9NZL3 707 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 SLC9A2Q9UBY0 812 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 GTF2A1LQ9UNN4 478 aa4.28□□□□□ -1.72
PTPN12-215ENST00000522115 LSM4Q9Y4Z0 139 aaKnown RBP4.28□□□□□ -1.72
PTPN12-215ENST00000522115 hDV102S1A0JD36 115 aa4.27□□□□□ -1.73
PTPN12-215ENST00000522115 GOLGA6L9A6NEM1 432 aa4.27□□□□□ -1.73
PTPN12-215ENST00000522115 BCAT2O15382 392 aaPredicted RBP4.27□□□□□ -1.73
PTPN12-215ENST00000522115 SEC14L5O43304 696 aa4.27□□□□□ -1.73
PTPN12-215ENST00000522115 PLRG1O43660 514 aaKnown RBP4.27□□□□□ -1.73
PTPN12-215ENST00000522115 PMS2P2O95744 297 aa4.27□□□□□ -1.73
PTPN12-215ENST00000522115 MAOAP21397 527 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms