RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 NIPAL4Q0D2K0 466 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 KIF5AQ12840 1032 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 IRF4Q15306 451 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 WSCD2Q2TBF2 565 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 INAVAQ3KP66 663 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 TPRG1LQ5T0D9 272 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 ARMC12Q5T9G4 340 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 LIPIQ6XZB0 460 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 DCP2Q8IU60 420 aaKnown RBP20.75■□□□□ 0.91
TRIM35-203ENST00000521253 CCDC50Q8IVM0 306 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 RBM41Q96IZ5 413 aaKnown RBP20.75■□□□□ 0.91
TRIM35-203ENST00000521253 IL12RB2Q99665 862 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 CAAP1Q9H8G2 361 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 PHTF1Q9UMS5 762 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 SPTY2D1-AS1A0A0U1RR47 76 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 MACROD2A1Z1Q3 448 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 FZD6O60353 706 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 SDC3O75056 442 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 PDHA1P08559 390 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 ELFN1P0C7U0 828 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 PECAM1P16284 738 aaPredicted RBP20.74■□□□□ 0.91
TRIM35-203ENST00000521253 CES1P23141 567 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 PMLP29590 882 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 NR2C2P49116 596 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 PDE1CQ14123 709 aaPredicted RBP20.74■□□□□ 0.91
TRIM35-203ENST00000521253 FZD2Q14332 565 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 LRRC14Q15048 493 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 AGERQ15109 404 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 FAM182AQ5T1J6 154 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 B4GALNT4Q76KP1 1039 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 KANSL1Q7Z3B3 1105 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 TXLNBQ8N3L3 684 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 CNTD1Q8N815 330 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 PIH1D2Q8WWB5 315 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 CDC6Q99741 560 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 CEP41Q9BYV8 373 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 BRD8Q9H0E9 1235 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 PCDHA3Q9Y5H8 950 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 TP53BP1Q12888 1972 aaPredicted RBP20.74■□□□□ 0.91
TRIM35-203ENST00000521253 CEP295Q9C0D2 2601 aa20.74■□□□□ 0.91
TRIM35-203ENST00000521253 RECQL5O94762 991 aaPredicted RBP20.73■□□□□ 0.91
TRIM35-203ENST00000521253 TGM2P21980 687 aa20.73■□□□□ 0.91
TRIM35-203ENST00000521253 PPP2R5EQ16537 467 aa20.73■□□□□ 0.91
TRIM35-203ENST00000521253 ZNF542PQ5EBM4 170 aa20.73■□□□□ 0.91
TRIM35-203ENST00000521253 BZW1Q7L1Q6 419 aaKnown RBP20.73■□□□□ 0.91
TRIM35-203ENST00000521253 GLRX5Q86SX6 157 aa20.73■□□□□ 0.91
TRIM35-203ENST00000521253 IFT43Q96FT9 208 aa20.73■□□□□ 0.91
TRIM35-203ENST00000521253 SEPT10Q9P0V9 454 aa20.73■□□□□ 0.91
TRIM35-203ENST00000521253 ANKRD36A6QL64 1941 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 MMP2P08253 660 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 GM2AP17900 193 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 NFKBIAP25963 317 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 CTNNA2P26232 953 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 VIPR1P32241 457 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 PEX5P50542 639 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 FOXC1Q12948 553 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 PRKD1Q15139 912 aaPredicted RBP20.72■□□□□ 0.91
TRIM35-203ENST00000521253 PTPRRQ15256 657 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 CNGA3Q16281 694 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 NT5DC3Q86UY8 548 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 PARGQ86W56 976 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 HAUS1Q96CS2 278 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 SCRN2Q96FV2 425 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 MCCC1Q96RQ3 725 aaPredicted RBP20.72■□□□□ 0.91
TRIM35-203ENST00000521253 HEMGNQ9BXL5 484 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 TDRD1Q9BXT4 1180 aaKnown RBP20.72■□□□□ 0.91
TRIM35-203ENST00000521253 DNAJC28Q9NX36 388 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 PPIL1Q9Y3C6 166 aa20.72■□□□□ 0.91
TRIM35-203ENST00000521253 CCDC66A2RUB6 948 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 NPIPB15A6NHN6 443 aaPredicted RBP20.71■□□□□ 0.91
TRIM35-203ENST00000521253 GOLGA8CPA6NN73 597 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 TOR1BO14657 336 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 HEXIM1O94992 359 aaKnown RBP20.71■□□□□ 0.91
TRIM35-203ENST00000521253 FTH1P19P0C7X4 201 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 CTPS1P17812 591 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 LHCGRP22888 699 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 DGKAP23743 735 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 CD86P42081 329 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 THOP1P52888 689 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 COPS2P61201 443 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 YPEL5P62699 121 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 BBS12Q6ZW61 710 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 USP45Q70EL2 814 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 SLC25A45Q8N413 288 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 EID2Q8N6I1 236 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 ALG3Q92685 438 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 P3H4Q92791 437 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 AGAP3Q96P47 875 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 SMIM14Q96QK8 99 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 HERPUD2Q9BSE4 406 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 UCKL1Q9NWZ5 548 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 FTSJ1Q9UET6 329 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 CHKBQ9Y259 395 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 ADGRG1Q9Y653 693 aa20.71■□□□□ 0.91
TRIM35-203ENST00000521253 TNFSF14O43557 240 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 PIAS2O75928 621 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 PRLP01236 227 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 CSF2P04141 144 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 PCCBP05166 539 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 ALPIP09923 528 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms