RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 NRF1Q16656 503 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 MARC1Q5VT66 337 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 IRAK1BP1Q5VVH5 260 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 AFMIDQ63HM1 303 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 OVOS1Q6IE37 1185 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 PTAR1Q7Z6K3 402 aaPredicted RBP11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 CLYBLQ8N0X4 340 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 LENG1Q96BZ8 264 aaPredicted RBP11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 L3HYPDHQ96EM0 354 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 ZNF419Q96HQ0 510 aaPredicted RBP11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 C1orf74Q96LT6 269 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 RTP3Q9BQQ7 232 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 TRIM15Q9C019 465 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 SEMA6AQ9H2E6 1030 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 COQ10BQ9H8M1 238 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 ATXN10Q9UBB4 475 aa11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 COL4A4P53420 1690 aaPredicted RBP11.39□□□□□ -0.59
NUDCD1-203ENST00000519607 PTPRDP23468 1912 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 TCRBV3S1A0A5B6 114 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 WASH4PA8MWX3 477 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 FBP2O00757 339 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 AURKAO14965 403 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 HOXC8P31273 242 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 AFF1P51825 1210 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 SLC5A3P53794 718 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 MLLT6P55198 1093 aaPredicted RBP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 INHBEP58166 350 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 TXNL4AP83876 142 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 APOFQ13790 326 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 FSCN1Q16658 493 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 KIF19Q2TAC6 998 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 PRMT9Q6P2P2 845 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 KDELC1Q6UW63 502 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 TSPAN14Q8NG11 270 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ZFP28Q8NHY6 868 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 LRTOMTQ8WZ04 291 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 CASP10Q92851 521 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 IMP4Q96G21 291 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 MFSD1Q9H3U5 465 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 SPON1Q9HCB6 807 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 NT5MQ9NPB1 228 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 NDFIP2Q9NV92 336 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 MPP6Q9NZW5 540 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 TMEM181Q9P2C4 612 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 CD300AQ9UGN4 299 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 PRORSD1PA6NEY8 169 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 PDLIM1O00151 329 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 MSI1O43347 362 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ASLP04424 464 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 KCNA5P22460 613 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 HERVK_113P63132 956 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 PURAQ00577 322 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 IKBKEQ14164 716 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 CYTH1Q15438 398 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 PPP1R3AQ16821 1122 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 GEN1Q17RS7 908 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ZNF678Q5SXM1 525 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 C9orf131Q5VYM1 1079 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ZNF280DQ6N043 979 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 AGMOQ6ZNB7 445 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ZBTB49Q6ZSB9 765 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 LARP4Q71RC2 724 aaKnown RBP eCLIP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ZNF354CQ86Y25 554 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 METTL25Q8N6Q8 603 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 FATE1Q969F0 183 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 C19orf60Q96EN9 201 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 CCT7Q99832 543 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 HOPXQ9BPY8 73 aaPredicted RBP11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 PAAF1Q9BRP4 392 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 TMEM79Q9BSE2 394 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ERVK-6Q9BXR3 956 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 SLC2A11Q9BYW1 496 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 GSTO2Q9H4Y5 243 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ALG9Q9H6U8 611 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 SP110Q9HB58 689 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 ATP13A1Q9HD20 1204 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 TMCO1Q9UM00 188 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 MYRFQ9Y2G1 1151 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 HS3ST4Q9Y661 456 aa11.38□□□□□ -0.59
NUDCD1-203ENST00000519607 PATJQ8NI35 1801 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 KPNA6O60684 536 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 CSPG5O95196 566 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 H6PDO95479 791 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 CD86P42081 329 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 BRCC3P46736 316 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 NFKB2Q00653 900 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 RALGDSQ12967 914 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 GK3PQ14409 553 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 MYLK3Q32MK0 819 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 PAN2Q504Q3 1202 aaKnown RBP11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 ZNF789Q5FWF6 425 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 LAYNQ6UX15 382 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 CYP2R1Q6VVX0 501 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 CHERPQ8IWX8 916 aaKnown RBP11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 UMODL1-AS1Q8N2C9 162 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 OR2T34Q8NGX1 318 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 OR2T3Q8NH03 318 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 UHRF1Q96T88 793 aaPredicted RBP11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 TIMMDC1Q9NPL8 285 aa11.37□□□□□ -0.59
NUDCD1-203ENST00000519607 RGS18Q9NS28 235 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms