RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TRUB2O95900 331 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ACOT2P49753 483 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 RPS8P62241 208 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 SEMA5AQ13591 1074 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 LIPMQ5VYY2 423 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 LCN8Q6JVE9 175 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 STRADAQ7RTN6 431 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 FBXO11Q86XK2 927 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ERO1BQ86YB8 467 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 GPD1LQ8N335 351 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 EMC1Q8N766 993 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 DTX3Q8N9I9 347 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 TP53I13Q8NBR0 393 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 LEMD2Q8NC56 503 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 TMEM161BQ8NDZ6 487 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 URGCPQ8TCY9 931 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ASB2Q96Q27 587 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 KCTD14Q9BQ13 255 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 IDI2Q9BXS1 227 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 INTS10Q9NVR2 710 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 CCDC167Q9P0B6 97 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 EGFL7Q9UHF1 273 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 FZD1Q9UP38 647 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 PTPRJQ12913 1337 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 SAGE2PA6NJ88 616 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 C16orf96A6NNT2 1141 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 NME4O00746 187 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 USP12O75317 370 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 ENDOD1O94919 500 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 MAP3K6O95382 1288 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 PTGS2P35354 604 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 GP5P40197 560 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 HTR2BP41595 481 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 GJA9P57773 515 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 GABARAPL2P60520 117 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 IMPG1Q17R60 797 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 THAP5Q7Z6K1 395 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 UBE2Q1Q7Z7E8 422 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 METTL4Q8N3J2 472 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 KDM1BQ8NB78 822 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 BEST2Q8NFU1 509 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 MFSD3Q96ES6 412 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 RNF170Q96K19 258 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 DMRTB1Q96MA1 342 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 PEBP4Q96S96 227 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 FAM213AQ9BRX8 229 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 WDR11Q9BZH6 1224 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 DHX35Q9H5Z1 703 aaKnown RBP13.61□□□□□ -0.23
PABPC1-208ENST00000519004 HPS4Q9NQG7 708 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 TJP2Q9UDY2 1190 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 HMGXB4Q9UGU5 601 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 FBXO5Q9UKT4 447 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 NAALAD2Q9Y3Q0 740 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 A0A096LPK6 155 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 BCLAF3A2AJT9 711 aaKnown RBP13.61□□□□□ -0.23
PABPC1-208ENST00000519004 PDZK1P1A8MUH7 402 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 ZNF99A8MXY4 864 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-208ENST00000519004 MEN1O00255 615 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 CHRNA1P02708 482 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 SNRPB2P08579 225 aaKnown RBP13.61□□□□□ -0.23
PABPC1-208ENST00000519004 ARP10275 920 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 FCGR1AP12314 374 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 AP2S1P53680 142 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-208ENST00000519004 TAGLNQ01995 201 aaKnown RBP13.61□□□□□ -0.23
PABPC1-208ENST00000519004 ENPEPQ07075 957 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 SQLEQ14534 574 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 PPP1R3AQ16821 1122 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 COLEC12Q5KU26 742 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 PXDC1Q5TGL8 231 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 CASC4Q6P4E1 433 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 ZYG11AQ6WRX3 759 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 PRSS48Q7RTY5 328 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 ZNF438Q7Z4V0 828 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 TTYH2Q9BSA4 534 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 RPRD1BQ9NQG5 326 aaKnown RBP13.61□□□□□ -0.23
PABPC1-208ENST00000519004 POLHQ9Y253 713 aa13.61□□□□□ -0.23
PABPC1-208ENST00000519004 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 A0A1W2PQ72 361 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 FAM25AB3EWG3 89 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 FAM25CB3EWG5 89 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 FAM25GB3EWG6 89 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 TK2O00142 265 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 NRP2O60462 931 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 F7P08709 466 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-208ENST00000519004 SBK3P0C264 359 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 GFAPP14136 432 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 DDOSTP39656 456 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 NAGLUP54802 743 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 CLDN10P78369 228 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 GPAT2Q6NUI2 795 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 UBQLNLQ8IYU4 475 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 FBXL6Q8N531 539 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 PLD5Q8N7P1 536 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 PSD4Q8NDX1 1056 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 CHDHQ8NE62 594 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-208ENST00000519004 GIMAP1Q8WWP7 306 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 PROX1Q92786 737 aa13.6□□□□□ -0.23
PABPC1-208ENST00000519004 ATXN7L3BQ96GX2 97 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms