RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 USP12O75317 370 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GJB3O75712 270 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLU7O95391 586 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 AP2A1O95782 977 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TRBC1P01850 177 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PRKCGP05129 697 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PYGLP06737 847 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZNF30P17039 623 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PAMP19021 973 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ITIH2P19823 946 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CR2P20023 1033 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MAT2AP31153 395 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ACSL1P33121 698 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CD68P34810 354 aaPredicted RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HNF1BP35680 557 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NPY2RP49146 381 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LIG3P49916 1009 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CCR5P51681 352 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ADPRHP54922 357 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GDF10P55107 478 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ARL4CP56559 192 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C21orf59P57076 290 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SESN2P58004 480 aaPredicted RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SEMA5AQ13591 1074 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PTK6Q13882 451 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SPARCL1Q14515 664 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HLTFQ14527 1009 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 STAT4Q14765 748 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLC1A5Q15758 541 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 QPCTQ16769 361 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZNF284Q2VY69 593 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MAP7D1Q3KQU3 841 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TMEM52BQ4KMG9 183 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LRRC73Q5JTD7 316 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SIRPB2Q5JXA9 342 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SPDYCQ5MJ68 293 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZDHHC20Q5W0Z9 365 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 KIAA0895LQ68EN5 471 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DPPA4Q7L190 304 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ARMCX6Q7L4S7 300 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NLRP9Q7RTR0 991 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CYP2U1Q7Z449 544 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GLT6D1Q7Z4J2 308 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RABEPKQ7Z6M1 372 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HORMAD1Q86X24 394 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 IFT20Q8IY31 132 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TMEFF1Q8IYR6 380 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PDIK1LQ8N165 341 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DEFB119Q8N690 84 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 OTUD6BQ8N6M0 293 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GPR161Q8N6U8 529 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CADM4Q8NFZ8 388 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 IFT81Q8WYA0 676 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLCO2A1Q92959 643 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 OXNAD1Q96HP4 312 aaPredicted RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HSPA12BQ96MM6 686 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TTC1Q99614 292 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 APOL2Q9BQE5 337 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ERP44Q9BS26 406 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLC17A9Q9BYT1 436 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DPH5Q9H2P9 285 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SEMA4AQ9H3S1 761 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZFYVE1Q9HBF4 777 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MAGEE1Q9HCI5 957 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 XAB2Q9HCS7 855 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 EIF2B3Q9NR50 452 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FAM114A2Q9NRY5 505 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C2orf42Q9NWW7 574 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NCDNQ9UBB6 729 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 B4GALT6Q9UBX8 382 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MTRF1LQ9UGC7 380 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GMEB2Q9UKD1 530 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DMTF1Q9Y222 760 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FNDC3AQ9Y2H6 1198 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FADS3Q9Y5Q0 445 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C5orf42Q9H799 3197 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 XIRP2A4UGR9 3374 aa5.47□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LOC285095A0A1B0GVY8 99 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TSPAN11A1L157 253 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 MAGEB16A2A368 324 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 HEATR9A2RTY3 570 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 RGSL1A5PLK6 1076 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 IGLON5A6NGN9 336 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 SDR42E2A6NKP2 422 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GOLGA8CPA6NN73 597 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 METTL12A8MUP2 240 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 F8W8V4 182 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PRAMEF26H0Y7S4 382 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 GOLGA8MH3BSY2 632 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PSMD11O00231 422 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 TRAFD1O14545 582 aaPredicted RBP5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 RAD51CO43502 376 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PPFIA2O75334 1257 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PAK4O96013 591 aaPredicted RBP5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 IGLV3-19P01714 112 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 MMP2P08253 660 aa5.46□□□□□ -1.54
SCARNA16.4-201ENST00000516956 PDHA1P08559 390 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms