RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 KDELC2Q7Z4H8 507 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 TSPAN33Q86UF1 283 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 TEX26Q8N6G2 289 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 PLD5Q8N7P1 536 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 ACRBPQ8NEB7 543 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 HCAR2Q8TDS4 363 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 ASB12Q8WXK4 309 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 GPR27Q9NS67 375 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 SEPT10Q9P0V9 454 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 INTUQ9ULD6 942 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 CHKBQ9Y259 395 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 RAI2Q9Y5P3 530 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 EPN1Q9Y6I3 576 aaPredicted RBP11.55□□□□□ -0.56
VCAN-212ENST00000515397 SHROOM3Q8TF72 1996 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 USP24Q9UPU5 2620 aa11.55□□□□□ -0.56
VCAN-212ENST00000515397 TP53BP1Q12888 1972 aaPredicted RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 A0A0U1RQJ8 604 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 K7ESM1 405 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 APOL1O14791 398 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 YKT6O15498 198 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 GCATO75600 419 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 CPP00450 1065 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 CSF2P04141 144 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 HLA-DQB2P05538 268 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 ELFN1P0C7U0 828 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 CCNB1P14635 433 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 CCNCP24863 283 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 CYLC1P35663 651 aaPredicted RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 POLR2LP62875 67 aaKnown RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 AP1B1Q10567 949 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 ZBTB17Q13105 803 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 SPA17Q15506 151 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 CNGA3Q16281 694 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 ST3GAL2Q16842 350 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 DEFB133Q30KQ1 61 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 INAVAQ3KP66 663 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 ODF2Q5BJF6 829 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 FAXCQ5TGI0 409 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 ENPP7Q6UWV6 458 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 UNQ6494/PRO21346Q6UXR6 183 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 DPPA4Q7L190 304 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 PARGQ86W56 976 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 DCP2Q8IU60 420 aaKnown RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 HID1Q8IV36 788 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 RHOT1Q8IXI2 618 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 BBS5Q8N3I7 341 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 DENND6BQ8NEG7 585 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 ZNF548Q8NEK5 533 aaPredicted RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 MAML1Q92585 1016 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 GATA6Q92908 595 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 TSGA13Q96PP4 275 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 PANX2Q96RD6 677 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 APOOQ9BUR5 198 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 C1QTNF7Q9BXJ2 289 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 TMEM121BQ9BXQ6 578 aaPredicted RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 SUDS3Q9H7L9 328 aaPredicted RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 REXO2Q9Y3B8 237 aaKnown RBP11.54□□□□□ -0.56
VCAN-212ENST00000515397 MSRB2Q9Y3D2 182 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 NEUROG3Q9Y4Z2 214 aa11.54□□□□□ -0.56
VCAN-212ENST00000515397 NPIPB15A6NHN6 443 aaPredicted RBP11.53□□□□□ -0.56
VCAN-212ENST00000515397 F5H423 210 aaPredicted RBP11.53□□□□□ -0.56
VCAN-212ENST00000515397 CASC3O15234 703 aaKnown RBP11.53□□□□□ -0.56
VCAN-212ENST00000515397 NDUFA10O95299 355 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 PGLSO95336 258 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 LCA5LO95447 670 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 NME1P15531 152 aaKnown RBP11.53□□□□□ -0.56
VCAN-212ENST00000515397 CKMT2P17540 419 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 LHCGRP22888 699 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 HNF1BP35680 557 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 HSPA9P38646 679 aaKnown RBP11.53□□□□□ -0.56
VCAN-212ENST00000515397 ETV3P41162 512 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 SLC1A1P43005 524 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 ACADVLP49748 655 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 SUOXP51687 545 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 NAP1L1P55209 391 aaKnown RBP11.53□□□□□ -0.56
VCAN-212ENST00000515397 HNRNPKP61978 463 aaKnown RBP eCLIP11.53□□□□□ -0.56
VCAN-212ENST00000515397 DAB2P98082 770 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 TCEAL1Q15170 157 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 PROX2Q3B8N5 592 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 PRRT3Q5FWE3 981 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 ARMC12Q5T9G4 340 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 SLC9A4Q6AI14 798 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 CCNI2Q6ZMN8 369 aaPredicted RBP11.53□□□□□ -0.56
VCAN-212ENST00000515397 HSD11B1LQ7Z5J1 315 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 LRRC49Q8IUZ0 686 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 CCDC13Q8IYE1 715 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 CCDC170Q8IYT3 715 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 PHACTR4Q8IZ21 702 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 CNTD1Q8N815 330 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 OR4C6Q8NH72 309 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 ARRDC2Q8TBH0 407 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 PIH1D2Q8WWB5 315 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 KRT35Q92764 455 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 HAUS1Q96CS2 278 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 LGR4Q9BXB1 951 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 HEMGNQ9BXL5 484 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 LACRTQ9GZZ8 138 aa11.53□□□□□ -0.56
VCAN-212ENST00000515397 CLPBQ9H078 707 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms