RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 FSTL5Q8N475 847 aaPredicted RBP10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 PLA2G15Q8NCC3 412 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 IL12RB2Q99665 862 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 ZNF670Q9BS34 389 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 APOOQ9BUR5 198 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 PACSIN1Q9BY11 444 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 CLPBQ9H078 707 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 UVRAGQ9P2Y5 699 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 OR1A2Q9Y585 309 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 KNL1Q8NG31 2342 aa10.51□□□□□ -0.73
HMGXB3-205ENST00000514469 LRP4O75096 1905 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 LOC400499M0QZD8 3231 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 A0A1W2PQ67 120 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 SSU72P8A0A1W2PR75 194 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 TTC24A2A3L6 582 aaPredicted RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 EME2A4GXA9 379 aaPredicted RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 CBFA2T2O43439 604 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 RECQL5O94762 991 aaPredicted RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 CPP00450 1065 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 CELA2BP08218 269 aaPredicted RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 HTR1BP28222 390 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 MAN1A1P33908 653 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 MMP13P45452 471 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 BLKP51451 505 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 ADKP55263 362 aaKnown RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 GALNT2Q10471 571 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 TRAF2Q12933 501 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 MMRN1Q13201 1228 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 C1orf61Q13536 156 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 PAFAH1B3Q15102 231 aaKnown RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 NR0B2Q15466 257 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 CDKN3Q16667 212 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 HADHQ16836 314 aaKnown RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 FAXCQ5TGI0 409 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 MARC1Q5VT66 337 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 KCTD16Q68DU8 428 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 NCBP2-AS2Q69YL0 99 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 ESRP1Q6NXG1 681 aaKnown RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 LRRC49Q8IUZ0 686 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 SLC35F3Q8IY50 421 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 BBS5Q8N3I7 341 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 TEX26Q8N6G2 289 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 ATL2Q8NHH9 583 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 MAPK15Q8TD08 544 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 CTNNBL1Q8WYA6 563 aaPredicted RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 FUBP1Q96AE4 644 aaKnown RBP10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 FAF2Q96CS3 445 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 COQ10AQ96MF6 247 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 WDR92Q96MX6 357 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 DEPDC7Q96QD5 511 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 NOD2Q9HC29 1040 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 CTTNBP2NLQ9P2B4 639 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 B4GALT6Q9UBX8 382 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 KLQ9UEF7 1012 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 LCMT1Q9UIC8 334 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 PCDHB1Q9Y5F3 818 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 PCDHGC4Q9Y5F7 938 aa10.5□□□□□ -0.73
HMGXB3-205ENST00000514469 YY2O15391 372 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 TLX3O43711 291 aaPredicted RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 BRINP1O60477 761 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 MFAP3LO75121 409 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 HEXIM1O94992 359 aaKnown RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 RASGRP1O95267 797 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ANXA6P08133 673 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 HOXC4P09017 264 aaPredicted RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ALPIP09923 528 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 H2AFZP0C0S5 128 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 TMEM253P0C7T8 217 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 TGM2P21980 687 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 VIPR1P32241 457 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 GJC1P36383 396 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 TRIM23P36406 574 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 GARSP41250 739 aaKnown RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 SSR1P43307 286 aaKnown RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 TAS2R40P59535 323 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 SRP54P61011 504 aaKnown RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 MAXP61244 160 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 PDK2Q15119 407 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ELOCQ15369 112 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 CNGA3Q16281 694 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 COL28A1Q2UY09 1125 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ATP13A4Q4VNC1 1196 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ANKRD20A8PQ5CZ79 823 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 PERM1Q5SV97 790 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ALG1LQ6GMV1 187 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 LVRNQ6Q4G3 990 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 C19orf48Q6RUI8 117 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ENPP7Q6UWV6 458 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 H2AFVQ71UI9 128 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 EFL1Q7Z2Z2 1120 aaKnown RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 HID1Q8IV36 788 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 VSTM4Q8IW00 320 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 SDR16C5Q8N3Y7 309 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ARL10Q8N8L6 244 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 OR8K1Q8NGG5 319 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 PCDH19Q8TAB3 1148 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 SNIP1Q8TAD8 396 aaKnown RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 NSMCE1Q8WV22 266 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 MAML1Q92585 1016 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms