RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 GCATO75600 419 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 LHCGRP22888 699 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 ITPKAP23677 461 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 CNR2P34972 360 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 RPL22P35268 128 aaKnown RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 MMP12P39900 470 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 NBL1P41271 181 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 EPHB1P54762 984 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 CREB5Q02930 508 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 SFSWAPQ12872 951 aaKnown RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 DSG2Q14126 1118 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 FGL2Q14314 439 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 ELF2Q15723 593 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 CNGA3Q16281 694 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 CYP1B1Q16678 543 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 QPCTQ16769 361 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 RALGPS1Q5JS13 557 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 LYSMD4Q5XG99 296 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 DRICH1Q6PGQ1 229 aaPredicted RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 BRAT1Q6PJG6 821 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 CCDC137Q6PK04 289 aaKnown RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 RGL4Q8IZJ4 473 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 ZCCHC9Q8N567 271 aaKnown RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 C12orf50Q8NA57 414 aaPredicted RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 RMDN1Q96DB5 314 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 RTP4Q96DX8 246 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 IFT43Q96FT9 208 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 SLC6A18Q96N87 628 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 TRIB3Q96RU7 358 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 NAP1L3Q99457 506 aaPredicted RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 RAB6BQ9NRW1 208 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 FAM153AQ9UHL3 310 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 EIF2B4Q9UI10 523 aaKnown RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 GPR179Q6PRD1 2367 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 A0A0J9YYE9 177 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 IGLON5A6NGN9 336 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 CAPN8A6NHC0 703 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 WNT9AO14904 365 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 RAD51BO15315 384 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 SLC31A1O15431 190 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 AGTP01019 485 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 TRBC1P01850 177 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 ATXN1LP0C7T5 689 aaKnown RBP9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 C6P13671 934 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 VIPR1P32241 457 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 HNF1BP35680 557 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 PAFAH1B1P43034 410 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 LIG3P49916 1009 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 GEMP55040 296 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 BASP1P80723 227 aaKnown RBP9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 CDK18Q07002 472 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 PRPSAP1Q14558 356 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 ZNF284Q2VY69 593 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 P3H1Q32P28 736 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 SIRPB2Q5JXA9 342 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 LRRC66Q68CR7 880 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 ERAP2Q6P179 960 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 RFLNAQ6ZTI6 216 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 MICALCLQ6ZW33 695 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 DPPA4Q7L190 304 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 CYP2U1Q7Z449 544 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 HORMAD1Q86X24 394 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 SUMF1Q8NBK3 374 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 CXorf40AQ8TE69 158 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 PIGKQ92643 395 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 KRT12Q99456 494 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 ORAI3Q9BRQ5 295 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 TRIM51Q9BSJ1 452 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 FSD1LQ9BXM9 530 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 KCNH6Q9H252 994 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 ARRDC1-AS1Q9H2J1 176 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 ETNK1Q9HBU6 452 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 PREBQ9HCU5 417 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 TMEM74BQ9NUR3 256 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 RAB23Q9ULC3 237 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 PHTF1Q9UMS5 762 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 SHOC2Q9UQ13 582 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 SPO11Q9Y5K1 396 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 TP53BP1Q12888 1972 aaPredicted RBP9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 SCN8AQ9UQD0 1980 aa9.84□□□□□ -0.83
TOPBP1-209ENST00000513818 TCRBV7S3A2A0A539 114 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 METTL12A8MUP2 240 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 PATE3B3GLJ2 98 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 AURKAO14965 403 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 AP1G1O43747 822 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 RHOBTB1O94844 696 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 EPN2O95208 641 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 NDST3O95803 873 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 KRT14P02533 472 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 C1SP09871 688 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 ELFN1P0C7U0 828 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 GM2AP17900 193 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 CA4P22748 312 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 CES1P23141 567 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 MPLP40238 635 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 GRIA1P42261 906 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 GRIA4P48058 902 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 FNTAP49354 379 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms