RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CCNHP51946 323 aaPredicted RBP9.98□□□□□ -0.81
CCL28-203ENST00000513525 ZNF143P52747 638 aaPredicted RBP9.98□□□□□ -0.81
CCL28-203ENST00000513525 AIF1P55008 147 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 DHX34Q14147 1143 aaKnown RBP9.98□□□□□ -0.81
CCL28-203ENST00000513525 ZNF284Q2VY69 593 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 TMEM259Q4ZIN3 620 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 KIAA1161Q6NSJ0 714 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 RWDD4Q6NW29 188 aaKnown RBP9.98□□□□□ -0.81
CCL28-203ENST00000513525 MREGQ8N565 214 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 SNIP1Q8TAD8 396 aaKnown RBP9.98□□□□□ -0.81
CCL28-203ENST00000513525 MAIP1Q8WWC4 291 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 SEC14L1Q92503 715 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 KRT35Q92764 455 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 KLHDC7BQ96G42 594 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 LRIG1Q96JA1 1093 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 AP1M1Q9BXS5 423 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 EPB41L5Q9HCM4 733 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 DKK4Q9UBT3 224 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 HPCAL4Q9UM19 191 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 ZFR2Q9UPR6 939 aaKnown RBP9.98□□□□□ -0.81
CCL28-203ENST00000513525 URB1O60287 2271 aaKnown RBP9.98□□□□□ -0.81
CCL28-203ENST00000513525 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 ITPR1Q14643 2758 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 ZFYVE26Q68DK2 2539 aa9.98□□□□□ -0.81
CCL28-203ENST00000513525 ASXL3Q9C0F0 2248 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 ZSCAN5CA6NGD5 496 aaPredicted RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 PSTPIP1O43586 416 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 RAMP2O60895 175 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 PHF2O75151 1096 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 GSRP00390 522 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 THEGLP0DJG4 465 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 ADRB3P13945 408 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 SNRPBP14678 240 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 AKT2P31751 481 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 BNIP3Q12983 259 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 MAMLD1Q13495 774 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 CYP1B1Q16678 543 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 HSP90B2PQ58FF3 399 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 EFHC2Q5JST6 749 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 ALS2CLQ60I27 953 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 DNAJC24Q6P3W2 148 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 ABI3BPQ7Z7G0 1075 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 RTL3Q8N8U3 475 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 OR2AP1Q8NGE2 309 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 CASKIN2Q8WXE0 1202 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 RAB7BQ96AH8 199 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 VOPP1Q96AW1 172 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 IFT43Q96FT9 208 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 CNDP2Q96KP4 475 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 MCEEQ96PE7 176 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 CNPY3Q9BT09 278 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 MAGEB5Q9BZ81 275 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 DDX47Q9H0S4 455 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 RAB17Q9H0T7 212 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 FAM114A2Q9NRY5 505 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 GPR27Q9NS67 375 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 IP6K2Q9UHH9 426 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 FADS3Q9Y5Q0 445 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 RP1P56715 2156 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 WASH4PA8MWX3 477 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 TAF4O00268 1085 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 SLC31A1O15431 190 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 KDELR3O43731 214 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 RFPL3O75679 317 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 PCDH8O95206 1070 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 PYGMP11217 842 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 OAS2P29728 719 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 HTR7P34969 479 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 MARCKSL1P49006 195 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 ACADVLP49748 655 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 YBEYP58557 167 aaPredicted RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 SNRPD1P62314 119 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 RPL7AP62424 266 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 RPS21P63220 83 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 ZNF211Q13398 564 aaPredicted RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 POLD3Q15054 466 aaPredicted RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 FBXL19Q6PCT2 694 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 GCNT7Q6ZNI0 430 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 PARS2Q7L3T8 475 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 TMPRSS12Q86WS5 348 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 SLC13A5Q86YT5 568 aaPredicted RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 DCP2Q8IU60 420 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 EID2Q8N6I1 236 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 FAM71BQ8TC56 605 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 OSBPL1AQ9BXW6 950 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 TM6SF2Q9BZW4 377 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 CCDC86Q9H6F5 360 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 NOL6Q9H6R4 1146 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 ZDHHC6Q9H6R6 413 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 PCYOX1Q9UHG3 505 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 FZD10Q9ULW2 581 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 CA5BQ9Y2D0 317 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 UTP11Q9Y3A2 253 aaKnown RBP9.97□□□□□ -0.81
CCL28-203ENST00000513525 ACTL7AQ9Y615 435 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 HS3ST3A1Q9Y663 406 aa9.97□□□□□ -0.81
CCL28-203ENST00000513525 TMEM191CA6NGB0 347 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 A6NNZ2 444 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 DESP17661 470 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 EPHB2P29323 1055 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 MLLT3P42568 568 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms