RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 FAM220AQ7Z4H9 259 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 FAM126BQ8IXS8 530 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 TMEM192Q8IY95 271 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ZNF563Q8TA94 476 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 OVCA2Q8WZ82 227 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 LMLNQ96KR4 655 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SUSD3Q96L08 255 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 THTPAQ9BU02 230 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ST6GALNAC4Q9H4F1 302 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PRDM12Q9H4Q4 367 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SLC9A8Q9Y2E8 581 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SIK3Q9Y2K2 1263 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 RAI2Q9Y5P3 530 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 AGRPO00253 132 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 RPP40O75818 363 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 PPP1R37O75864 691 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ECDO95905 644 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 ADH1BP00325 375 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SOD2P04179 222 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 H2AFXP16104 143 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 SERPINB3P29508 390 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 L1CAMP32004 1257 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SCNN1AP37088 669 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 POLD2P49005 469 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 HNMTP50135 292 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 HK2P52789 917 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 IL10RBQ08334 325 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 VAC14Q08AM6 782 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 KCNMA1Q12791 1236 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PWP1Q13610 501 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SLC29A2Q14542 456 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 CCDC142Q17RM4 750 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 BMT2Q1RMZ1 405 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PPP1R26Q5T8A7 1209 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 PRSS55Q6UWB4 352 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 KYAT3Q6YP21 454 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 KBTBD6Q86V97 674 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 UNC5BQ8IZJ1 945 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 GPR152Q8TDT2 470 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 FOXJ1Q92949 421 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 C5orf34Q96MH7 638 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ZNF607Q96SK3 696 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 RNF19AQ9NV58 838 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.26□□□□□ -1.73
VCAN-209ENST00000513016 CROTQ9UKG9 612 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 CORO1CQ9ULV4 474 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 ROBO3Q96MS0 1386 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 TMX2-CTNND1H3BSU7 103 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 KERAO60938 352 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ATP5F1P24539 256 aaPredicted RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 ELK3P41970 407 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 WNT3AP56704 352 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PLIN5Q00G26 463 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 BMPR2Q13873 1038 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ANGPT1Q15389 498 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 VPS26BQ4G0F5 336 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 FBXO43Q4G163 708 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 UBXN11Q5T124 520 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PHF19Q5T6S3 580 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 BROXQ5VW32 411 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 TRIM40Q6P9F5 258 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 KLHL24Q6TFL4 600 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 FAM228AQ86W67 206 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 GSPT2Q8IYD1 628 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 EID3Q8N140 333 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 FAR1Q8WVX9 515 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SHC3Q92529 594 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 KLHDC7BQ96G42 594 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SPATA9Q9BWV2 254 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 GKN1Q9NS71 199 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 TDP1Q9NUW8 608 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 BCLAF3A2AJT9 711 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 USP27XA6NNY8 438 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 SCAMP3O14828 347 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 ULK1O75385 1050 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ADRB2P07550 413 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 BMP7P18075 431 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 CCNCP24863 283 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PSMB4P28070 264 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PBX3P40426 434 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 CYP4F8P98187 520 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PPP3CAQ08209 521 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ZNF792Q3KQV3 632 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 DAB2IPQ5VWQ8 1189 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 C16orf87Q6PH81 154 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 EPHX4Q8IUS5 362 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PCDH20Q8N6Y1 951 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 TTLQ8NG68 377 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 WDR36Q8NI36 951 aaKnown RBP4.26□□□□□ -1.73
VCAN-209ENST00000513016 PHOSPHO2Q8TCD6 241 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 NELL1Q92832 810 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 BADQ92934 168 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 CEP41Q9BYV8 373 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 RERGLQ9H628 205 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 BPIFA1Q9NP55 256 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 PLK2Q9NYY3 685 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 IL36AQ9UHA7 158 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 CD207Q9UJ71 328 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 CFL2Q9Y281 166 aa4.26□□□□□ -1.73
VCAN-209ENST00000513016 ZFP37Q9Y6Q3 630 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms