RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 LRP4O75096 1905 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 ZNF487B1APH4 448 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 DFFAO00273 331 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 FPGTO14772 594 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 SCAMP1O15126 338 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 SIGLEC6O43699 453 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 TLX3O43711 291 aaPredicted RBP13.57□□□□□ -0.24
CLDND1-224ENST00000511667 LZTS3O60299 673 aaPredicted RBP13.57□□□□□ -0.24
CLDND1-224ENST00000511667 TM7SF2O76062 418 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 CKMT2P17540 419 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 RENBPP51606 427 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 GALNT2Q10471 571 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 MMRN1Q13201 1228 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 DNAJC3Q13217 504 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 IHHQ14623 411 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 WSCD2Q2TBF2 565 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 ATP13A4Q4VNC1 1196 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 LRRC73Q5JTD7 316 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 NCBP2-AS2Q69YL0 99 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 KDM7AQ6ZMT4 941 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 TMPRSS12Q86WS5 348 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 VSIG1Q86XK7 387 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 PQLC3Q8N755 202 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 MAML1Q92585 1016 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 HSPH1Q92598 858 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 TSGA13Q96PP4 275 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 NUDCD1Q96RS6 583 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 ZNF670Q9BS34 389 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 CALN1Q9BXU9 219 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 ATP13A3Q9H7F0 1226 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 SP110Q9HB58 689 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 NLGN3Q9NZ94 848 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 ATP8A1Q9Y2Q0 1164 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 PPIL1Q9Y3C6 166 aa13.57□□□□□ -0.24
CLDND1-224ENST00000511667 COL12A1Q99715 3063 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 C3orf70A6NLC5 250 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-224ENST00000511667 SDC3O75056 442 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 SOCS5O75159 536 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 RFPL3O75679 317 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 CKMT1AP12532 417 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 C6P13671 934 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 SERPINA4P29622 427 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 SERPINB6P35237 376 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 CSRP3P50461 194 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 PEX5P50542 639 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 CDH6P55285 790 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 HNRNPKP61978 463 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLDND1-224ENST00000511667 CXADRP78310 365 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 RHDQ02161 417 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 SEMG2Q02383 582 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 PDK2Q15119 407 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 DPPA4Q7L190 304 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 PTAR1Q7Z6K3 402 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-224ENST00000511667 ZNF548Q8NEK5 533 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-224ENST00000511667 CTNNBL1Q8WYA6 563 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-224ENST00000511667 CINPQ9BW66 212 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-224ENST00000511667 NHEJ1Q9H9Q4 299 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-224ENST00000511667 INTUQ9ULD6 942 aa13.56□□□□□ -0.24
CLDND1-224ENST00000511667 SPTAN1Q13813 2472 aaKnown RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 NEMP1O14524 444 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 TPP1O14773 563 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 SLC28A2O43868 658 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 FZD6O60353 706 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 LCA5LO95447 670 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 HOXC4P09017 264 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 TRIM23P36406 574 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 GARSP41250 739 aaKnown RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 ARHGAP25P42331 645 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 LIG3P49916 1009 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 HADHBP55084 474 aaKnown RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 ADKP55263 362 aaKnown RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 PDE1CQ14123 709 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 IRF4Q15306 451 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 HADHQ16836 314 aaKnown RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 ANKRD20A8PQ5CZ79 823 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 DHRS13Q6UX07 377 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 LIPIQ6XZB0 460 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 MACC1Q6ZN28 852 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 TC2NQ8N9U0 490 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 SNIP1Q8TAD8 396 aaKnown RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 SLC35G2Q8TBE7 412 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 MCCC1Q96RQ3 725 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 WRAP53Q9BUR4 548 aaKnown RBP13.55□□□□□ -0.24
CLDND1-224ENST00000511667 C1QTNF7Q9BXJ2 289 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 USP29Q9HBJ7 922 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 NOD2Q9HC29 1040 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 CTTNBP2NLQ9P2B4 639 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 AK5Q9Y6K8 562 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 DOPEY2Q9Y3R5 2298 aa13.55□□□□□ -0.24
CLDND1-224ENST00000511667 MYLKQ15746 1914 aa13.54□□□□□ -0.24
CLDND1-224ENST00000511667 A0A1W2PQ67 120 aa13.54□□□□□ -0.24
CLDND1-224ENST00000511667 K7ESM1 405 aa13.54□□□□□ -0.24
CLDND1-224ENST00000511667 MFSD11O43934 449 aa13.54□□□□□ -0.24
CLDND1-224ENST00000511667 KRT7P08729 469 aa13.54□□□□□ -0.24
CLDND1-224ENST00000511667 FECHP22830 423 aa13.54□□□□□ -0.24
CLDND1-224ENST00000511667 HNF1BP35680 557 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms