RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CFIP05156 583 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 PDHA1P08559 390 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 ZNF806P0C7X5 589 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 PRLRP16471 622 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 HNRNPA2B1P22626 353 aaKnown RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 MAOBP27338 520 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 AKT2P31751 481 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 STIP1P31948 543 aaKnown RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 VIPR1P32241 457 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 GEMP55040 296 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 CDK18Q07002 472 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 SPEM2Q0P670 501 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 SNX1Q13596 522 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 CSRP2Q16527 193 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 PCSK7Q16549 785 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 TRIM61Q5EBN2 209 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 PAPD7Q5XG87 772 aaKnown RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 CCDC70Q6NSX1 233 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 C17orf53Q8N3J3 647 aaPredicted RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 CCDC89Q8N998 374 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 FAM71DQ8N9W8 422 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 C12orf50Q8NA57 414 aaPredicted RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 DENND6BQ8NEG7 585 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 LPCAT1Q8NF37 534 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 SPATA22Q8NHS9 363 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 CCDC110Q8TBZ0 833 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 COG1Q8WTW3 980 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 PIH1D2Q8WWB5 315 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 ASB12Q8WXK4 309 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 SKA1Q96BD8 255 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 SCRN2Q96FV2 425 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 ORAI3Q9BRQ5 295 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 NUSAP1Q9BXS6 441 aaKnown RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 SLC17A9Q9BYT1 436 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 TM9SF3Q9HD45 589 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 TMEM74BQ9NUR3 256 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 B4GALT6Q9UBX8 382 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 AAR2Q9Y312 384 aaKnown RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 PPIL1Q9Y3C6 166 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 GON4LQ3T8J9 2241 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 IGLON5A6NGN9 336 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 PSMD11O00231 422 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 GCATO75600 419 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 NDST3O95803 873 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 PRKCGP05129 697 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 C6P13671 934 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 ZNF30P17039 623 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 PSMB4P28070 264 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 LIG3P49916 1009 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 GDF10P55107 478 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 RALGDSQ12967 914 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 ARHGEF7Q14155 803 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 IHHQ14623 411 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 CCDC6Q16204 474 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 KDELC1Q6UW63 502 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 C1orf216Q8TAB5 229 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 FAM174AQ8TBP5 190 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 RMDN1Q96DB5 314 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 OXNAD1Q96HP4 312 aaPredicted RBP12.91□□□□□ -0.34
COL6A6-203ENST00000511332 MS4A14Q96JA4 679 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 SLC6A18Q96N87 628 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 TRIB3Q96RU7 358 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 C1QTNF2Q9BXJ5 285 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 AASDHPPTQ9NRN7 309 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 KCTD5Q9NXV2 234 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 UBP1Q9NZI7 540 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 SLC6A14Q9UN76 642 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 SAR1BQ9Y6B6 198 aa12.91□□□□□ -0.34
COL6A6-203ENST00000511332 LRP4O75096 1905 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 FRYLO94915 3013 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 GPR179Q6PRD1 2367 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 NPIPB15A6NHN6 443 aaPredicted RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 ANKRD66B4E2M5 251 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 F5H423 210 aaPredicted RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 SLC31A1O15431 190 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 LZTS3O60299 673 aaPredicted RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 MAGEC1O60732 1142 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 MMP20O60882 483 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 HEXIM1O94992 359 aaKnown RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 PRLP01236 227 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 IFNB1P01574 187 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 EPOP01588 193 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 SYPP08247 313 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 CTPS1P17812 591 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 ITIH2P19823 946 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 HLA-DPA1P20036 260 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 CD38P28907 300 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 WNT3AP56704 352 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 ETF1P62495 437 aaKnown RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 LMNB2Q03252 620 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 OVGP1Q12889 678 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 GALNT3Q14435 633 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 STAT4Q14765 748 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 AGERQ15109 404 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 CNGA3Q16281 694 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 LIPIQ6XZB0 460 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 GSTA5Q7RTV2 222 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms