RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 CBX3Q13185 183 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 ITPK1Q13572 414 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 SLC15A2Q16348 729 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 INAQ16352 499 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 PLEKHS1Q5SXH7 462 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 ERMARDQ5T6L9 678 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 DEPDC1Q5TB30 811 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 GARNL3Q5VVW2 1013 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 CYP20A1Q6UW02 462 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 ZYG11AQ6WRX3 759 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 PPP1R21Q6ZMI0 780 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 CATSPERGQ6ZRH7 1159 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 DENND5BQ6ZUT9 1274 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 SMIM5Q71RC9 77 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 ATG9AQ7Z3C6 839 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 R3HCC1LQ7Z5L2 792 aaKnown RBP5.17□□□□□ -1.58
SCARB2-205ENST00000511129 TAGAPQ8N103 731 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 SLC44A3Q8N4M1 653 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 CNNM3Q8NE01 707 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 Q8NFD4 153 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 BPIFB1Q8TDL5 484 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 ZNF384Q8TF68 577 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 PIGBQ92521 554 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 LPIN2Q92539 896 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 KTI12Q96EK9 354 aaPredicted RBP5.17□□□□□ -1.58
SCARB2-205ENST00000511129 RAB3IPQ96QF0 476 aaPredicted RBP5.17□□□□□ -1.58
SCARB2-205ENST00000511129 MAGEB5Q9BZ81 275 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 EHD1Q9H4M9 534 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 ANO10Q9NW15 660 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 AATFQ9NY61 560 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCARB2-205ENST00000511129 MID2Q9UJV3 735 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 SERTAD3Q9UJW9 196 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 ANAPC5Q9UJX4 755 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 AURKCQ9UQB9 309 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 WDR37Q9Y2I8 494 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 TBC1D30Q9Y2I9 924 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 NUP98P52948 1817 aa5.17□□□□□ -1.58
SCARB2-205ENST00000511129 CEMIPQ8WUJ3 1361 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 MAP3K5Q99683 1374 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 LAMB2P55268 1798 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 SBF1O95248 1867 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 TMCO5BA8MYB1 307 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 H7C4K7 107 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 WDR46O15213 610 aaKnown RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 PEX11AO75192 247 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 FGFR1OPO95684 399 aaKnown RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 S100A6P06703 90 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 HMOX1P09601 288 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 ACVR2AP27037 513 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 ABCD3P28288 659 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 PPP2R1AP30153 589 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 PRKAR1BP31321 381 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 EIF2DP41214 584 aaKnown RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 FOLR3P41439 243 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 GDF5P43026 501 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 ABCG1P45844 678 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 PTDSS1P48651 473 aaKnown RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 CPT1AP50416 773 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 CETN1Q12798 172 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 RPA4Q13156 261 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 STK11Q15831 433 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 HSP90AA5PQ58FG0 334 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 GLRA4Q5JXX5 417 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 CYP4A22Q5TCH4 519 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 IGFL4Q6B9Z1 124 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 SULT6B1Q6IMI4 303 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 VWA1Q6PCB0 445 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 INO80CQ6PI98 192 aaPredicted RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 Q6ZNX1 250 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 FAM83HQ6ZRV2 1179 aaPredicted RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 RABEPKQ7Z6M1 372 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 VRK3Q8IV63 474 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 FAM217AQ8IXS0 508 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 ULK2Q8IYT8 1036 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 ARL14Q8N4G2 192 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 LINC00469Q8N7U9 141 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 RTL3Q8N8U3 475 aaKnown RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 TDRD5Q8NAT2 981 aaKnown RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 RFWD2Q8NHY2 731 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 MYCBPAPQ8TBZ2 947 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 SGCDQ92629 289 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 CASP10Q92851 521 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 PGAP3Q96FM1 320 aaPredicted RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 COQ10AQ96MF6 247 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 MAP7D2Q96T17 732 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 GAL3ST1Q99999 423 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 THUMPD3Q9BV44 507 aaKnown RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 BRD8Q9H0E9 1235 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 BRF2Q9HAW0 419 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 IL1RAPL2Q9NP60 686 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 SLC35C2Q9NQQ7 365 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 SNX15Q9NRS6 342 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 NDUFAF4Q9P032 175 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 AKAP7Q9P0M2 348 aaPredicted RBP5.16□□□□□ -1.58
SCARB2-205ENST00000511129 LRIT1Q9P2V4 623 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 KLHL20Q9Y2M5 609 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 LYVE1Q9Y5Y7 322 aa5.16□□□□□ -1.58
SCARB2-205ENST00000511129 CCDC88AQ3V6T2 1871 aa5.15□□□□□ -1.58
SCARB2-205ENST00000511129 LOC100653049A0A140TA62 436 aa5.15□□□□□ -1.59
SCARB2-205ENST00000511129 LRRIQ4A6NIV6 560 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms