RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	OR56A4	Q8NGH8	313 aa		10.8	□□□□□ -0.68
PTCD2-208	ENST00000510676	UBA3	Q8TBC4	463 aa		10.8	□□□□□ -0.68
PTCD2-208	ENST00000510676	ZDHHC1	Q8WTX9	485 aa		10.8	□□□□□ -0.68
PTCD2-208	ENST00000510676	RPRD1A	Q96P16	312 aa	Predicted RBP	10.8	□□□□□ -0.68
PTCD2-208	ENST00000510676	ULBP3	Q9BZM4	244 aa		10.8	□□□□□ -0.68
PTCD2-208	ENST00000510676	ACSS2	Q9NR19	701 aa		10.8	□□□□□ -0.68
PTCD2-208	ENST00000510676	ABCA4	P78363	2273 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	SSU72P8	A0A1W2PR75	194 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	ZMPSTE24	O75844	475 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	ENDOD1	O94919	500 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	STS	P08842	583 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	HOXC4	P09017	264 aa	Predicted RBP	10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	CCNB1	P14635	433 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	GARS	P41250	739 aa	Known RBP	10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	STAT6	P42226	847 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	SERPINH1	P50454	418 aa	Known RBP	10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	CDH4	P55283	916 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	SLC20A2	Q08357	652 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	DNASE1L3	Q13609	305 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	LAMB3	Q13751	1172 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	RAPGEF1	Q13905	1077 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	NRROS	Q86YC3	692 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	GLIS1	Q8NBF1	620 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	GALNT6	Q8NCL4	622 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	ISG20	Q96AZ6	181 aa	Known RBP	10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	HSFY1	Q96LI6	401 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	SMAD5	Q99717	465 aa	Known RBP	10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	NUDT9	Q9BW91	350 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	TNMD	Q9H2S6	317 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	ACTL8	Q9H568	366 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	KBTBD4	Q9NVX7	518 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	TMEM63C	Q9P1W3	806 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	SLC12A6	Q9UHW9	1150 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	FBXO2	Q9UK22	296 aa	Predicted RBP	10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	B3GNT3	Q9Y2A9	372 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	NTNG1	Q9Y2I2	539 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	CHD5	Q8TDI0	1954 aa		10.79	□□□□□ -0.68
PTCD2-208	ENST00000510676	RTTN	Q86VV8	2226 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676		A0A0D9SEW6	157 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	CXorf51A	A0A1B0GTR3	108 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	TRUB2	O95900	331 aa	Known RBP	10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	TRIM49	P0CI25	452 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	TRIM49C	P0CI26	452 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	SLC2A3	P11169	496 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	CASP14	P31944	242 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	TXLNA	P40222	546 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	STAT1	P42224	750 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	RPL34	P49207	117 aa	Known RBP	10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	RGS7	P49802	495 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	MTM1	Q13496	603 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	ZNF235	Q14590	738 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	LCLAT1	Q6UWP7	414 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	SETD3	Q86TU7	594 aa	Predicted RBP	10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	FDCSP	Q8NFU4	85 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	CXorf40A	Q8TE69	158 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	C14orf79	Q96F83	325 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	ZDHHC6	Q9H6R6	413 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	HECA	Q9UBI9	543 aa	Predicted RBP	10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	USP25	Q9UHP3	1055 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	VANGL2	Q9ULK5	521 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	OSGIN2	Q9Y236	505 aa		10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	SRPRB	Q9Y5M8	271 aa	Known RBP	10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676	COPG1	Q9Y678	874 aa	Known RBP	10.78	□□□□□ -0.68
PTCD2-208	ENST00000510676		A0A1B0GUH1	482 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	ARGFX	A6NJG6	315 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	PIK3R2	O00459	728 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	E2F3	O00716	465 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	SART1	O43290	800 aa	Known RBP	10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	GRID2	O43424	1007 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	KEL	P23276	732 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	SRSF11	Q05519	484 aa	Known RBP	10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	ENPEP	Q07075	957 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	PPP3CA	Q08209	521 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	MTA1	Q13330	715 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	ADAM9	Q13443	819 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	TSR1	Q2NL82	804 aa	Known RBP	10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	TMEM52B	Q4KMG9	183 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	RETSAT	Q6NUM9	610 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	ZGRF1	Q86YA3	2104 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	NAGS	Q8N159	534 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	CCDC150	Q8NCX0	1101 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	FUBP1	Q96AE4	644 aa	Known RBP	10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	STAMBPL1	Q96FJ0	436 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	EEF2KMT	Q96G04	330 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	TRIM62	Q9BVG3	475 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	OSBPL1A	Q9BXW6	950 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	GPR87	Q9BY21	358 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	LRRC27	Q9C0I9	530 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	TAAR2	Q9P1P5	351 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	C5AR2	Q9P296	337 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	PADI1	Q9ULC6	663 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	KIAA1257	Q9ULG3	409 aa		10.77	□□□□□ -0.69
PTCD2-208	ENST00000510676	MAPK13	O15264	365 aa		10.76	□□□□□ -0.69
PTCD2-208	ENST00000510676	RHOC	P08134	193 aa		10.76	□□□□□ -0.69
PTCD2-208	ENST00000510676	SNRPB2	P08579	225 aa	Known RBP	10.76	□□□□□ -0.69
PTCD2-208	ENST00000510676	ANKRD34C	P0C6C1	535 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms