RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 CINPQ9BW66 212 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 TDRD1Q9BXT4 1180 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 CADM1Q9BY67 442 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 DRC3Q9H069 523 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 MRPL46Q9H2W6 279 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 CYP4F11Q9HBI6 524 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 CD248Q9HCU0 757 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF334Q9HCZ1 680 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 PNPOQ9NVS9 261 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 SPG21Q9NZD8 308 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 MARCH4Q9P2E8 410 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 BAIAP2L1Q9UHR4 511 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 TAGLN3Q9UI15 199 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 AGO1Q9UL18 857 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 CORO1CQ9ULV4 474 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 ATP11BQ9Y2G3 1177 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 STK38LQ9Y2H1 464 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 ACOT9Q9Y305 439 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 KCTD3Q9Y597 815 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 INSL5Q9Y5Q6 135 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 ZFP37Q9Y6Q3 630 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 CEP350Q5VT06 3117 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 DNAH12Q6ZR08 3092 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 GREB1Q4ZG55 1949 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 NUP205Q92621 2012 aa4.79□□□□□ -1.64
PDLIM5-214ENST00000510099 DOCK4Q8N1I0 1966 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 SHROOM3Q8TF72 1996 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 MYLKQ15746 1914 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 OR51F1A6NGY5 319 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PRR5-ARHGAP8B1AHC4 643 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 SPECC1L-ADORA2AF8WAN1 911 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 MATN2O00339 956 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 CCL22O00626 93 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 KIAA0355O15063 1070 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 GSC2O15499 205 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 INSIG1O15503 277 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 DLX3O60479 287 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 NPHS1O60500 1241 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 MAGEC1O60732 1142 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 LILRB3O75022 631 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ZMPSTE24O75844 475 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 TMCC1O94876 653 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 SNUPNO95149 360 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 GOT2P00505 430 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PRLP01236 227 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 F11P03951 625 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ENO1P06733 434 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 CHRNGP07510 517 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 LTA4HP09960 611 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 LINC00271P0C7V0 271 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 IRF1P10914 325 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 MBL2P11226 248 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ESRRAP11474 423 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 GM2AP17900 193 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 SAT1P21673 171 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 CES1P23141 567 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 GLDCP23378 1020 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 CCND1P24385 295 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ATP5F1P24539 256 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PRDX6P30041 224 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 GRIA4P48058 902 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 GLRBP48167 497 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 MNAT1P51948 309 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 RAP1GDS1P52306 607 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 STC1P52823 247 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PGGT1BP53609 377 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 EPHB3P54753 998 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ALDH18A1P54886 795 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC12A2P55011 1212 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PRAMEP78395 509 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ARF5P84085 180 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ARHGAP8P85298 464 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 NFKB2Q00653 900 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ASPHQ12797 758 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PRKAA1Q13131 559 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF177Q13360 481 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 GALNT3Q14435 633 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 CYTH1Q15438 398 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 FAM83EQ2M2I3 478 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PUS10Q3MIT2 529 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PREPLQ4J6C6 727 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 DNAL1Q4LDG9 190 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 RALGPS1Q5JS13 557 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 SPOUT1Q5T280 376 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 WLSQ5T9L3 541 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 IL31Q6EBC2 164 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 FAM45BPQ6NSW5 357 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 AFTPHQ6ULP2 937 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 EPGNQ6UW88 154 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 RINLQ6ZS11 566 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 PIWIL4Q7Z3Z4 852 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 TMC7Q7Z402 723 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ITIH5Q86UX2 942 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 TMC8Q8IU68 726 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 HERC6Q8IVU3 1022 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 LSMEM2Q8N112 164 aa4.78□□□□□ -1.64
PDLIM5-214ENST00000510099 ENDOVQ8N8Q3 282 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms