RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GIMD1P0DJR0 217 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 MYF5P13349 255 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 EPHA8P29322 1005 aaPredicted RBP13.63□□□□□ -0.23
SNF8-206ENST00000509989 CD68P34810 354 aaPredicted RBP13.63□□□□□ -0.23
SNF8-206ENST00000509989 HSPA9P38646 679 aaKnown RBP13.63□□□□□ -0.23
SNF8-206ENST00000509989 CD86P42081 329 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 CCT8P50990 548 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 PFN3P60673 137 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 IFI35P80217 286 aaPredicted RBP13.63□□□□□ -0.23
SNF8-206ENST00000509989 WASHC5Q12768 1159 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 EIF2B5Q13144 721 aaKnown RBP13.63□□□□□ -0.23
SNF8-206ENST00000509989 SGCGQ13326 291 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 GRM3Q14832 879 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 PRKD1Q15139 912 aaPredicted RBP13.63□□□□□ -0.23
SNF8-206ENST00000509989 CNGA3Q16281 694 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 TFDP3Q5H9I0 405 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 CFAP58Q5T655 872 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 DENND2CQ68D51 928 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 BRAT1Q6PJG6 821 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 IL27RAQ6UWB1 636 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 ERMP1Q7Z2K6 904 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 HSD11B1LQ7Z5J1 315 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 SLCO6A1Q86UG4 719 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 LRRC49Q8IUZ0 686 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 LRRC8AQ8IWT6 810 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 RCOR2Q8IZ40 523 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 RBFAQ8N0V3 343 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 SLC25A45Q8N413 288 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 EXD1Q8NHP7 514 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 SPATA22Q8NHS9 363 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 NSMCE1Q8WV22 266 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 AGAP3Q96P47 875 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 LENG8Q96PV6 779 aaPredicted RBP13.63□□□□□ -0.23
SNF8-206ENST00000509989 GDF3Q9NR23 364 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 TOR4AQ9NXH8 423 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 HS3ST3A1Q9Y663 406 aa13.63□□□□□ -0.23
SNF8-206ENST00000509989 COL5A1P20908 1838 aaPredicted RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 A6NNZ2 444 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 RECQL5O94762 991 aaPredicted RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 IPO7O95373 1038 aaKnown RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 ADRB1P08588 477 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 ATXN1LP0C7T5 689 aaKnown RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 CEACAM1P13688 526 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 MX2P20592 715 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 PTPN3P26045 913 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 HNF1BP35680 557 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 NUDT1P36639 197 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 CLDN6P56747 220 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 SIM1P81133 766 aaPredicted RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 ELP6Q0PNE2 266 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 SLC14A1Q13336 389 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 PDE1CQ14123 709 aaPredicted RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 TCEA2Q15560 299 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 TIGD7Q6NT04 549 aaPredicted RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 KYAT3Q6YP21 454 aaKnown RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 KDELC2Q7Z4H8 507 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 IQCHQ86VS3 1027 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 MARCH9Q86YJ5 346 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 CBARPQ8N350 705 aaPredicted RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 EID2Q8N6I1 236 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 RHBDD1Q8TEB9 315 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 ASB12Q8WXK4 309 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 FATE1Q969F0 183 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 RBM15Q96T37 977 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNF8-206ENST00000509989 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 TDRD1Q9BXT4 1180 aaKnown RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 POLR1EQ9GZS1 481 aaKnown RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 LUC7LQ9NQ29 371 aaKnown RBP13.62□□□□□ -0.23
SNF8-206ENST00000509989 UBP1Q9NZI7 540 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 GUCA1BQ9UMX6 200 aa13.62□□□□□ -0.23
SNF8-206ENST00000509989 TRIM38O00635 465 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 FPGTO14772 594 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 LZTS3O60299 673 aaPredicted RBP13.61□□□□□ -0.23
SNF8-206ENST00000509989 PCDHGA12O60330 932 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 SOCS5O75159 536 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 NEBLO76041 1014 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 MT-CYBP00156 380 aaPredicted RBP13.61□□□□□ -0.23
SNF8-206ENST00000509989 PCCBP05166 539 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 CELA2BP08218 269 aaPredicted RBP13.61□□□□□ -0.23
SNF8-206ENST00000509989 RXRGP48443 463 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 GSDMDP57764 484 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 KIF5AQ12840 1032 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 DNAJC3Q13217 504 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 INPP5AQ14642 412 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 PDK1Q15118 436 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 NOMO1Q15155 1222 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 TRIP6Q15654 476 aaKnown RBP13.61□□□□□ -0.23
SNF8-206ENST00000509989 PPP2R5EQ16537 467 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 KCTD19Q17RG1 926 aaPredicted RBP13.61□□□□□ -0.23
SNF8-206ENST00000509989 ODF2Q5BJF6 829 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 SLC45A4Q5BKX6 768 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 ERAP2Q6P179 960 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 CRTC1Q6UUV9 634 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 BBS12Q6ZW61 710 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 BBS5Q8N3I7 341 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 PAF1Q8N7H5 531 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 ACTL9Q8TC94 416 aa13.61□□□□□ -0.23
SNF8-206ENST00000509989 PTCD2Q8WV60 388 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms