RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 EPB41L4BQ9H329 900 aa17.54■□□□□ 0.4
RNF4-209ENST00000507784 LMAN1LQ9HAT1 526 aa17.54■□□□□ 0.4
RNF4-209ENST00000507784 MRM3Q9HC36 420 aaKnown RBP17.54■□□□□ 0.4
RNF4-209ENST00000507784 ZNF446Q9NWS9 450 aa17.54■□□□□ 0.4
RNF4-209ENST00000507784 HACD3Q9P035 362 aa17.54■□□□□ 0.4
RNF4-209ENST00000507784 SARDHQ9UL12 918 aa17.54■□□□□ 0.4
RNF4-209ENST00000507784 MRPS17Q9Y2R5 130 aaKnown RBP17.54■□□□□ 0.4
RNF4-209ENST00000507784 KCTD3Q9Y597 815 aa17.54■□□□□ 0.4
RNF4-209ENST00000507784 KRBA1A5PL33 1030 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 C2orf81A6NN90 581 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 C16orf96A6NNT2 1141 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 SPAG6O75602 509 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 USP1O94782 785 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 SHBGP04278 402 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 TIMP2P16035 220 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 HNF1BP35680 557 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 TMPRSS15P98073 1019 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 CAMK2GQ13555 558 aaPredicted RBP17.53■□□□□ 0.4
RNF4-209ENST00000507784 LRRC32Q14392 662 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 TAF1AQ15573 450 aaPredicted RBP17.53■□□□□ 0.4
RNF4-209ENST00000507784 SMAD1Q15797 465 aaKnown RBP17.53■□□□□ 0.4
RNF4-209ENST00000507784 LRRC73Q5JTD7 316 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 EOGTQ5NDL2 527 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 TSTD2Q5T7W7 516 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 FAM46CQ5VWP2 391 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 ALS2CLQ60I27 953 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 USP45Q70EL2 814 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 TTC7BQ86TV6 843 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 CACUL1Q86Y37 369 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 UBALD2Q8IYN6 164 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 GJD3Q8N144 294 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 SIX5Q8N196 739 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
RNF4-209ENST00000507784 PTCD2Q8WV60 388 aaKnown RBP17.53■□□□□ 0.4
RNF4-209ENST00000507784 ARRDC3Q96B67 414 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 MFSD3Q96ES6 412 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 PPP1R16AQ96I34 528 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 ZIM3Q96PE6 472 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 GABRG3Q99928 467 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 ACBD3Q9H3P7 528 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 MAGEE1Q9HCI5 957 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 PPANQ9NQ55 473 aaKnown RBP17.53■□□□□ 0.4
RNF4-209ENST00000507784 PPM1HQ9ULR3 514 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 ZNF711Q9Y462 761 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 ARL5AQ9Y689 179 aa17.53■□□□□ 0.4
RNF4-209ENST00000507784 A0A0U1RQS6 177 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 UPK3BL1B0FP48 263 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 UPK3BL2E5RIL1 263 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 PLK4O00444 970 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 AURKAO14965 403 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 ABHD2P08910 425 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 CYP2A6P11509 494 aaPredicted RBP17.52■□□□□ 0.4
RNF4-209ENST00000507784 PAMP19021 973 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 COL9A1P20849 921 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 NFKBIAP25963 317 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 STX2P32856 288 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 CCINQ13939 588 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 CRYMQ14894 314 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 STEAP4Q687X5 459 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 KIAA1211LQ6NV74 962 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 ESRP1Q6NXG1 681 aaKnown RBP17.52■□□□□ 0.4
RNF4-209ENST00000507784 FBXL19Q6PCT2 694 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 PARS2Q7L3T8 475 aaKnown RBP17.52■□□□□ 0.4
RNF4-209ENST00000507784 NLRP9Q7RTR0 991 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 OR2T3Q8NH03 318 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 HCAR2Q8TDS4 363 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 MRRFQ96E11 262 aaKnown RBP17.52■□□□□ 0.4
RNF4-209ENST00000507784 ZNF778Q96MU6 729 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 SRPK1Q96SB4 655 aaKnown RBP17.52■□□□□ 0.4
RNF4-209ENST00000507784 DKK3Q9UBP4 350 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 SLC2A6Q9UGQ3 507 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 MUTYHQ9UIF7 546 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 FAM169AQ9Y6X4 670 aa17.52■□□□□ 0.4
RNF4-209ENST00000507784 CKAP5Q14008 2032 aa17.52■□□□□ 0.39
RNF4-209ENST00000507784 C1orf232A0A0U1RR37 186 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 TSPAN11A1L157 253 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 CAPN8A6NHC0 703 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 FAM170BA6NMN3 283 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 POC1B-GALNT4F8VUJ3 575 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 LDB2O43679 373 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 ADAM23O75077 832 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 CHRM1P11229 460 aaPredicted RBP17.51■□□□□ 0.39
RNF4-209ENST00000507784 CHRNB1P11230 501 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 LPOP22079 712 aaPredicted RBP17.51■□□□□ 0.39
RNF4-209ENST00000507784 ITGB7P26010 798 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 TARSP26639 723 aaKnown RBP17.51■□□□□ 0.39
RNF4-209ENST00000507784 METAP1P53582 386 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 STARD6P59095 220 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 SATB1Q01826 763 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 PTPRCAPQ14761 206 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 STAT4Q14765 748 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 CNGA3Q16281 694 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 UGP2Q16851 508 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 ZNF776Q68DI1 518 aaPredicted RBP17.51■□□□□ 0.39
RNF4-209ENST00000507784 LYSMD3Q7Z3D4 306 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 TMEM135Q86UB9 458 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 IQCKQ8N0W5 287 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 GANCQ8TET4 914 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 STYXQ8WUJ0 223 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms