RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CDKN3Q16667 212 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 KCTD19Q17RG1 926 aaPredicted RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 TMEM259Q4ZIN3 620 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 KIAA1161Q6NSJ0 714 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 CEP68Q76N32 757 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 KDELC2Q7Z4H8 507 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 KLHL7Q8IXQ5 586 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 TMEFF1Q8IYR6 380 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 LPCAT1Q8NF37 534 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 IPMKQ8NFU5 416 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 FOXJ1Q92949 421 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 BIRC7Q96CA5 298 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 IFT43Q96FT9 208 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 SMIM14Q96QK8 99 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 ORAI3Q9BRQ5 295 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 ARNT2Q9HBZ2 717 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 RAB6BQ9NRW1 208 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 GOLGA6AQ9NYA3 693 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 B4GALT6Q9UBX8 382 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 TPX2Q9ULW0 747 aaKnown RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.9□□□□□ -0.34
TCOF1-210ENST00000506767 THADAQ6YHU6 1953 aa12.9□□□□□ -0.34
TCOF1-210ENST00000506767 CACNA1HO95180 2353 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 ABCA7Q8IZY2 2146 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 A0A1W2PQU0 124 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 CAPN8A6NHC0 703 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 NPIPB15A6NHN6 443 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-210ENST00000506767 FAM47DPA6NHR8 397 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 GFRA3O60609 400 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 SUN1O94901 812 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 PCDH8O95206 1070 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 ECEL1O95672 775 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 GAS8O95995 478 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 CYP2A6P11509 494 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-210ENST00000506767 CTPS1P17812 591 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 HLA-DPA1P20036 260 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 LHCGRP22888 699 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 VIPR1P32241 457 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 PTGER3P43115 390 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 EPHB1P54762 984 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
TCOF1-210ENST00000506767 MSLNQ13421 630 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-210ENST00000506767 OLIG2Q13516 323 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 PTK6Q13882 451 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 ELF2Q15723 593 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 SIRPB2Q5JXA9 342 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 DENND5AQ6IQ26 1287 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 CRTC1Q6UUV9 634 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 LIPIQ6XZB0 460 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 USP45Q70EL2 814 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 HORMAD1Q86X24 394 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 TAB3Q8N5C8 712 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-210ENST00000506767 DEFB119Q8N690 84 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 PAF1Q8N7H5 531 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 ASB12Q8WXK4 309 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 DNASE2BQ8WZ79 361 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 RMDN1Q96DB5 314 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 KRT12Q99456 494 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 TBL1YQ9BQ87 522 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 FICDQ9BVA6 458 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 C1QTNF2Q9BXJ5 285 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 FSD1LQ9BXM9 530 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 SEMA4AQ9H3S1 761 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 LRRC40Q9H9A6 602 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 EBF2Q9HAK2 575 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 MAGEE1Q9HCI5 957 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 EIF2B3Q9NR50 452 aaKnown RBP12.89□□□□□ -0.35
TCOF1-210ENST00000506767 LRRK1Q38SD2 2015 aa12.89□□□□□ -0.35
TCOF1-210ENST00000506767 PTPRZ1P23471 2315 aaPredicted RBP12.88□□□□□ -0.35
TCOF1-210ENST00000506767 PRR23AA6NEV1 266 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 PSMD11O00231 422 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 NEMP1O14524 444 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 MMP20O60882 483 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 HEXIM1O94992 359 aaKnown RBP12.88□□□□□ -0.35
TCOF1-210ENST00000506767 FSBPO95073 299 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 FGF1P05230 155 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 ZNF30P17039 623 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 GM2AP17900 193 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 MAGEA6P43360 314 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 CHRNA4P43681 627 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 LIG3P49916 1009 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 DR1Q01658 176 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 SEMG2Q02383 582 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 CREB5Q02930 508 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 C2orf54Q08AI8 447 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 GPS1Q13098 491 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 DHX34Q14147 1143 aaKnown RBP12.88□□□□□ -0.35
TCOF1-210ENST00000506767 FGL2Q14314 439 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 SPARCL1Q14515 664 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 AGERQ15109 404 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 CNGA3Q16281 694 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 ZNF284Q2VY69 593 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 PEAR1Q5VY43 1037 aaPredicted RBP12.88□□□□□ -0.35
TCOF1-210ENST00000506767 SEL1L3Q68CR1 1132 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 NAPEPLDQ6IQ20 393 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 CCDC70Q6NSX1 233 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 SYDE1Q6ZW31 735 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms