RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 PTSQ03393 145 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 C5orf22Q49AR2 442 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ZMAT1Q5H9K5 638 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 C6orf163Q5TEZ5 329 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 KIAA1324Q6UXG2 1013 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 CYP4V2Q6ZWL3 525 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF365Q70YC5 407 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 PXKQ7Z7A4 578 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 PHLDB2Q86SQ0 1253 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 LACC1Q8IV20 430 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ANKRD52Q8NB46 1076 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 PPFIBP2Q8ND30 876 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DDHD1Q8NEL9 900 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 HAS1Q92839 578 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ISL2Q96A47 359 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 OR5M11Q96RB7 305 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SEC62Q99442 399 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF184Q99676 751 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 PBX4Q9BYU1 374 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SLC6A14Q9UN76 642 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ANGEL1Q9UNK9 670 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 MAN2B2Q9Y2E5 1009 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 COL27A1Q8IZC6 1860 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ZMYM2Q9UBW7 1377 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 A0A0U1RQV5 110 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 A0A1W2PPC1 479 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SH3D21A4FU49 640 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 H0YJX3 145 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 PLOD3O60568 738 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DKC1O60832 514 aaKnown RBP eCLIP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 NIPSNAP2O75323 286 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 NDUFS6O75380 124 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DGAT1O75907 488 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 BAG2O95816 211 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 CRHP06850 196 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 RHOXF2BP0C7M4 288 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DPEP1P16444 411 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DDX5P17844 614 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ATF6P18850 670 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 RPS6KB1P23443 525 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ARNTP27540 789 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 GP5P40197 560 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 WNT5AP41221 380 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SEPHS1P49903 392 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 VCPP55072 806 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ERVK-24P63145 666 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 CDC16Q13042 620 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DMP1Q13316 513 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 HERC3Q15034 1050 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 Q5BKY6 102 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SLC9C2Q5TAH2 1124 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 PRAMEF18Q5VWM3 479 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 THAP5Q7Z6K1 395 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 GALNT5Q7Z7M9 940 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 TBC1D1Q86TI0 1168 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DNAAF5Q86Y56 855 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 CHERPQ8IWX8 916 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 EID3Q8N140 333 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SRBD1Q8N5C6 995 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ACTRT1Q8TDG2 376 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 CD101Q93033 1021 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 RADILQ96JH8 1075 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 WDFY2Q96P53 400 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 TUBA1CQ9BQE3 449 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 RHOXF2Q9BQY4 288 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 TRIT1Q9H3H1 467 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 UNKLQ9H9P5 680 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF277Q9NRM2 450 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 RGS18Q9NS28 235 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 TBC1D22BQ9NU19 505 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 NPAP1Q9NZP6 1156 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 EPHA6Q9UF33 1036 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ADGRE2Q9UHX3 823 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SCOCQ9UIL1 159 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 BAG5Q9UL15 447 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF214Q9UL59 606 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 TDRKHQ9Y2W6 561 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 GOLGA8IPA6NC78 632 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 NDUFS8O00217 210 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 COPEO14579 308 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DTNBO60941 627 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 TSC22D2O75157 780 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 RGS9O75916 674 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DNTTP04053 509 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 LYL1P12980 280 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF23P17027 643 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 PDCP20941 246 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 RFC2P35250 354 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 KCNJ1P48048 391 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 LEPRP48357 1165 aaKnown RBP2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SLC11A2P49281 568 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 POLE2P56282 527 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 HUNKP57058 714 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 NAA20P61599 178 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 SLC7A9P82251 487 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 COG7P83436 770 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 MTF1Q14872 753 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 DUOXA2Q1HG44 320 aa2.29□□□□□ -2.04
NEDD4-205ENST00000506154 MAJINQ3KP22 176 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms