RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 MRGPRX3Q96LB0 322 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 NSMCE3Q96MG7 304 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 TRIB3Q96RU7 358 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 CCDC77Q9BR77 488 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 NAT9Q9BTE0 207 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 ACSS3Q9H6R3 686 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 LTB4R2Q9NPC1 389 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 SLCO3A1Q9UIG8 710 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 SOX13Q9UN79 622 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 SLC8A2Q9UPR5 921 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 CHKBQ9Y259 395 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 PCDHGC4Q9Y5F7 938 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 NFS1Q9Y697 457 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 FRYQ5TBA9 3013 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 PKD1L2Q7Z442 2459 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 ZNF106Q9H2Y7 1883 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 LOC285095A0A1B0GVY8 99 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 TLDC2A0PJX2 215 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 TTC34A8MYJ7 566 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 PRRT4C9JH25 899 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 POC1B-GALNT4F8VUJ3 575 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 ARNTLO00327 626 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 ZNF821O75541 412 aaPredicted RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 SLC4A1P02730 911 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 POLBP06746 335 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 RETP07949 1114 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 SRPRAP08240 638 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 GSTA2P09210 222 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 DLDP09622 509 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 SERPINA4P29622 427 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 GKP32189 559 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 RECQLP46063 649 aaPredicted RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 RPS9P46781 194 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 SOX9P48436 509 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 CSNK1DP48730 415 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 CCNHP51946 323 aaPredicted RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 BCL2L1Q07817 233 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 MESP2Q0VG99 397 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 CRYMQ14894 314 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 EIF4HQ15056 248 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 SMAD1Q15797 465 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 PTPRNQ16849 979 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 FNDC3BQ53EP0 1204 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 CARD16Q5EG05 197 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 PCID2Q5JVF3 399 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 SPANXN3Q5MJ09 141 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 STEAP4Q687X5 459 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 CES3Q6UWW8 571 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 RASSF3Q86WH2 238 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 CCNJLQ8IV13 435 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 PHTF2Q8N3S3 785 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 TERB1Q8NA31 727 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 BLOC1S5Q8TDH9 187 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 MRRFQ96E11 262 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 ZDHHC6Q9H6R6 413 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 ATP13A3Q9H7F0 1226 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 MED4Q9NPJ6 270 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 SEMA4GQ9NTN9 838 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 ELOVL2Q9NXB9 296 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 HECAQ9UBI9 543 aaPredicted RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 MRPS17Q9Y2R5 130 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 TCAF1Q9Y4C2 921 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 RPS6KL1Q9Y6S9 549 aa9.41□□□□□ -0.9
TPM3-218ENST00000505010 FASNP49327 2511 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 CNOT1A5YKK6 2376 aaKnown RBP9.41□□□□□ -0.9
TPM3-218ENST00000505010 ANKRD11Q6UB99 2663 aaPredicted RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 FAM237BA0A1B0GVD1 139 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 MAGEB16A2A368 324 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 HEATR9A2RTY3 570 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 TBC1D3BA6NDS4 549 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 H3BQF6 201 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 RASGRF2O14827 1237 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 FOXD2O60548 495 aaPredicted RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 SOCS5O75159 536 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 USP1O94782 785 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 KAT7O95251 611 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PGLSO95336 258 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 EPOP01588 193 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 APODP05090 189 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PRKCGP05129 697 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PIRTP0C851 137 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 ADRA1DP25100 572 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 NMBRP28336 390 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PMLP29590 882 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 OAS2P29728 719 aaKnown RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 EIF2DP41214 584 aaKnown RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 EPHB1P54762 984 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 SHC2P98077 582 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 RAD51Q06609 339 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 MTAPQ13126 283 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 CSRP2Q16527 193 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 SKIDA1Q1XH10 827 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 MYLK3Q32MK0 819 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 PREPLQ4J6C6 727 aaPredicted RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 ARMC12Q5T9G4 340 aa9.4□□□□□ -0.9
TPM3-218ENST00000505010 N4BP2L1Q5TBK1 243 aaPredicted RBP9.4□□□□□ -0.9
TPM3-218ENST00000505010 PKN3Q6P5Z2 889 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms