RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 INPP5AQ14642 412 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 DEFB133Q30KQ1 61 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 KAZNQ674X7 775 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 TIGD7Q6NT04 549 aaPredicted RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 LIPIQ6XZB0 460 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 NYAP1Q6ZVC0 841 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 RHOT1Q8IXI2 618 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 PLA2G15Q8NCC3 412 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 ZNF548Q8NEK5 533 aaPredicted RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 ASB12Q8WXK4 309 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 FAF2Q96CS3 445 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 ECHDC3Q96DC8 303 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 LGMNQ99538 433 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 CEP41Q9BYV8 373 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 SUDS3Q9H7L9 328 aaPredicted RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 SEPT10Q9P0V9 454 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 APOBEC3BQ9UH17 382 aaKnown RBP14.32□□□□□ -0.12
HOXC9-202ENST00000504557 INTUQ9ULD6 942 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 CACNA1BQ00975 2339 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 FRYQ5TBA9 3013 aa14.32□□□□□ -0.12
HOXC9-202ENST00000504557 KCNK1O00180 336 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 MATN3O15232 486 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 MTA2O94776 668 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 CSF2P04141 144 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 HLA-DQB2P05538 268 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 ALPIP09923 528 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 ALPPL2P10696 532 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 CCNB1P14635 433 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 NME1P15531 152 aaKnown RBP14.31□□□□□ -0.12
HOXC9-202ENST00000504557 CKMT2P17540 419 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 ACADVLP49748 655 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 EPHB1P54762 984 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 NAP1L1P55209 391 aaKnown RBP14.31□□□□□ -0.12
HOXC9-202ENST00000504557 AP1B1Q10567 949 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 PRRT3Q5FWE3 981 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 ARMC12Q5T9G4 340 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 ENPP7Q6UWV6 458 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 DPPA4Q7L190 304 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 HID1Q8IV36 788 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 PHACTR4Q8IZ21 702 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 SPC24Q8NBT2 197 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 OR4C6Q8NH72 309 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 ZCCHC14Q8WYQ9 949 aaKnown RBP14.31□□□□□ -0.12
HOXC9-202ENST00000504557 GATA6Q92908 595 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 TSACCQ96A04 125 aaPredicted RBP14.31□□□□□ -0.12
HOXC9-202ENST00000504557 MRFAP1L1Q96HT8 127 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 SMIM14Q96QK8 99 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 APOOQ9BUR5 198 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 SLC13A1Q9BZW2 595 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 POLR1EQ9GZS1 481 aaKnown RBP14.31□□□□□ -0.12
HOXC9-202ENST00000504557 GPR27Q9NS67 375 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 DTLQ9NZJ0 730 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 MOSPD1Q9UJG1 213 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 PNMA8BQ9ULN7 279 aaPredicted RBP14.31□□□□□ -0.12
HOXC9-202ENST00000504557 RAI2Q9Y5P3 530 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 RP1P56715 2156 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 ASXL3Q9C0F0 2248 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 IGF2RP11717 2491 aa14.31□□□□□ -0.12
HOXC9-202ENST00000504557 NEMP2A6NFY4 417 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 C3orf70A6NLC5 250 aaPredicted RBP14.3□□□□□ -0.12
HOXC9-202ENST00000504557 K7ESM1 405 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 AQP9O43315 295 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 SOCS5O75159 536 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 PGLSO95336 258 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 JCHAINP01591 159 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 PROS1P07225 676 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 PDHA1P08559 390 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 KRT10P13645 584 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 MX2P20592 715 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 CCNCP24863 283 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 VIPR1P32241 457 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 SLC1A1P43005 524 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 YPEL5P62699 121 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 PPARDQ03181 441 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 ZNF211Q13398 564 aaPredicted RBP14.3□□□□□ -0.12
HOXC9-202ENST00000504557 ARHGEF7Q14155 803 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 PROX2Q3B8N5 592 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 MACC1Q6ZN28 852 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 TSPAN33Q86UF1 283 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 LRRC49Q8IUZ0 686 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 CCDC50Q8IVM0 306 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 CCDC13Q8IYE1 715 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 PLD5Q8N7P1 536 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 IFT43Q96FT9 208 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 APOLD1Q96LR9 279 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 IL12RB2Q99665 862 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 DDX56Q9NY93 547 aaKnown RBP14.3□□□□□ -0.12
HOXC9-202ENST00000504557 DOLKQ9UPQ8 538 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 CHKBQ9Y259 395 aa14.3□□□□□ -0.12
HOXC9-202ENST00000504557 ARHGEF17Q96PE2 2063 aaPredicted RBP14.3□□□□□ -0.12
HOXC9-202ENST00000504557 NPIPB15A6NHN6 443 aaPredicted RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 HTRA2O43464 458 aaPredicted RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 IPO7O95373 1038 aaKnown RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 CELA2BP08218 269 aaPredicted RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 CYP2A6P11509 494 aaPredicted RBP14.29□□□□□ -0.12
HOXC9-202ENST00000504557 CTSEP14091 401 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 JUPP14923 745 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 HTR1BP28222 390 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 NFATC4Q14934 902 aa14.29□□□□□ -0.12
HOXC9-202ENST00000504557 CNGA3Q16281 694 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms