RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PSKH2Q96QS6 385 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 G6PC3Q9BUM1 346 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 IMPG2Q9BZV3 1241 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 TRPV6Q9H1D0 765 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 KLC4Q9NSK0 619 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ZFP57Q9NU63 452 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 LIN7CQ9NUP9 197 aaKnown RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ZC3H12DA2A288 527 aaKnown RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 GOLGA8OA6NCC3 632 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 GOLGA8NF8WBI6 632 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 SLC33A1O00400 549 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 IL18BPO95998 194 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 S100A6P06703 90 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 BMI1P35226 326 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 GPR15P49685 360 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ADCY7P51828 1080 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 PTENP60484 403 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 RAP2BP61225 183 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 IRX1P78414 480 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 POU6F2P78424 691 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ABATP80404 500 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 CRYMQ14894 314 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 SKIDA1Q1XH10 827 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 JADE1Q6IE81 842 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 TAS1R1Q7RTX1 841 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 MIER3Q7Z3K6 550 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 SPATA24Q86W54 205 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 CCDC13Q8IYE1 715 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 OR2T3Q8NH03 318 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 MTMR9Q96QG7 549 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 OSBPL10Q9BXB5 764 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 GPR88Q9GZN0 384 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 NSRP1Q9H0G5 558 aaKnown RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 COMMD3-BMI1R4GMX3 469 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 SPACA6W5XKT8 324 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 KDM4EB2RXH2 506 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 PSMD9O00233 223 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 AKR7A2O43488 359 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 AKAP8O43823 692 aaKnown RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 RANBP6O60518 1105 aaKnown RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 SCGB2A1O75556 95 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ZNF573Q86YE8 665 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 OFCC1Q8IZS5 231 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 PIWIL2Q8TC59 973 aaKnown RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 BCAS4Q8TDM0 211 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 DVL3Q92997 716 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ARRDC3Q96B67 414 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 KCNK16Q96T55 309 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 STOML1Q9UBI4 398 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ZDHHC8Q9ULC8 765 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 PRELID1Q9Y255 219 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 COL15A1P39059 1388 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ATRNL1Q5VV63 1379 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ANKRD61A6NGH8 418 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RASGRF2O14827 1237 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 PER2O15055 1255 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SMAD9O15198 467 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 NRP2O60462 931 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 OR6B1O95007 311 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 IL1BP01584 269 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 FGBP02675 491 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 FYNP06241 537 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 OR52Z1P0C646 297 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 EPB41P11171 864 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SNRPBP14678 240 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 TCF4P15884 667 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SLC6A2P23975 617 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 S100A5P33763 92 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ARHGAP25P42331 645 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SLC11A1P49279 550 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ARHGDIBP52566 201 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 GALK2Q01415 458 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 GAD2Q05329 585 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SNTB2Q13425 540 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RAB3GAP1Q15042 981 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ZNF750Q32MQ0 723 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 COLEC12Q5KU26 742 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 MACC1Q6ZN28 852 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SV2AQ7L0J3 742 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RFX6Q8HWS3 928 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 OR7G3Q8NG95 312 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 CDC26Q8NHZ8 85 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 TBC1D32Q96NH3 1257 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 PKP2Q99959 881 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 FRMD8P1Q9BZ68 369 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 HAO2Q9NYQ3 351 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 VSX1Q9NZR4 365 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 MRPS2Q9Y399 296 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 PLEKHM1Q9Y4G2 1056 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 A0A1W2PPM1 405 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 GCOM1H8Y6P7 765 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 TTI1O43156 1089 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 NUDT21O43809 227 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ACSL4O60488 711 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 TULP3O75386 442 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 AGFG2O95081 481 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SBK2P0C263 348 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 LONP1P36776 959 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 PBX1P40424 430 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 CASRP41180 1078 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms