RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 TFEBP19484 476 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 HLA-DPA1P20036 260 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 PEX6Q13608 980 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 CSHL1Q14406 222 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 ACSBG2Q5FVE4 666 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 TECRLQ5HYJ1 363 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 WASHC2DQ5SRD0 308 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 TPGS2Q68CL5 300 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 RPS27LQ71UM5 84 aaKnown RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 POU5F2Q8N7G0 328 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 KDM1BQ8NB78 822 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 MDGA1Q8NFP4 955 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 WFDC5Q8TCV5 224 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 BRSK1Q8TDC3 778 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 SCYL1Q96KG9 808 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 NACA2Q9H009 215 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 MRPL46Q9H2W6 279 aaKnown RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 RNPEPL1Q9HAU8 725 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 TRPM5Q9NZQ8 1165 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 APOBEC2Q9Y235 224 aaKnown RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 MED16Q9Y2X0 877 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 VWA7Q9Y334 891 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 MIA3Q5JRA6 1907 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 MEI4A8MW99 385 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 TMEM233B4DJY2 109 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 NDST3O95803 873 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 FGF1P05230 155 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 SERPINF2P08697 491 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 LINC00271P0C7V0 271 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 SPATA31D3P0C874 917 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 MZF1P28698 734 aaPredicted RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 CLCN5P51795 746 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 ZNF140P52738 457 aaPredicted RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 MTA1Q13330 715 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 KPNB1Q14974 876 aaKnown RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 TAF11Q15544 211 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 SETMARQ53H47 684 aaPredicted RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 LINGO4Q6UY18 593 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 SPATA31D4Q6ZUB0 917 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 TMC7Q7Z402 723 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 TMPRSS6Q8IU80 811 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 ENDOVQ8N8Q3 282 aaKnown RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 MRPL57Q9BQC6 102 aaKnown RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 POLR3BQ9NW08 1133 aaPredicted RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 UBA2Q9UBT2 640 aaPredicted RBP9.08□□□□□ -0.96
LINC02239-201ENST00000504339 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 SORCS3Q9UPU3 1222 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 ATP11BQ9Y2G3 1177 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 CRYL1Q9Y2S2 319 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 RAP2CQ9Y3L5 183 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 OR51B4Q9Y5P0 310 aa9.08□□□□□ -0.96
LINC02239-201ENST00000504339 A0A087X1B8 175 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 GOLGA8QA0A0J9YX86 632 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 A0A1B0GVM2 712 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 GOLGA8OA6NCC3 632 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 TRIM43BA6NCK2 446 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 TCAF2A6NFQ2 919 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 E9PBE3 544 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 GOLGA8NF8WBI6 632 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 CBX4O00257 560 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 TEX28O15482 410 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 KLHL41O60662 606 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 SKAP2O75563 359 aaPredicted RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 CCDC166P0CW27 439 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 ARSAP15289 507 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 CSF2RAP15509 400 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 PSMA3P25788 255 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 RPL14P50914 215 aaKnown RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 SCNN1BP51168 640 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 RAP1GDS1P52306 607 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 OXCT1P55809 520 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 PFKPQ01813 784 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 GPR158Q5T848 1215 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 RNF219Q5W0B1 726 aaPredicted RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 TXNDC8Q6A555 127 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 CHST9Q7L1S5 443 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 ISCA2Q86U28 154 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 GPR150Q8NGU9 434 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 CALML6Q8TD86 181 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 TRIM43Q96BQ3 446 aaPredicted RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 PTERQ96BW5 349 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 ALG14Q96F25 216 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 IFT43Q96FT9 208 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 PPP1R36Q96LQ0 422 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 ZNF558Q96NG5 402 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 HERC2P3Q9BVR0 1158 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 ILKAPQ9H0C8 392 aaPredicted RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 MMADHCQ9H3L0 296 aaPredicted RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 RETREG1Q9H6L5 497 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 TMEM39AQ9NV64 488 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 RPL26L1Q9UNX3 145 aaKnown RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 PCDHGC4Q9Y5F7 938 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 ANAPC1Q9H1A4 1944 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 A0A088AWK7 358 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 A8MT66 165 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 HDAC3O15379 428 aa9.07□□□□□ -0.96
LINC02239-201ENST00000504339 CD3EAPO15446 510 aaKnown RBP9.07□□□□□ -0.96
LINC02239-201ENST00000504339 INSIG1O15503 277 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms