RNA–Protein interactions for RNA: ENST00000503501.1

SENP6-212, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 2,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-212ENST00000503501 PCNX3Q9H6A9 2034 aa0.85□□□□□ -2.27
SENP6-212ENST00000503501 FAM90A18PA6NE21 464 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 FAM90A16PA6NEW6 464 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 FAM90A9PA6NNJ1 464 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 FAM90A5PA8MXJ8 464 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 APOL1O14791 398 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 HEXIM1O94992 359 aaKnown RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 FAM90A15PP0C7V4 464 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 FAM90A14PP0C7W9 464 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 S1PR1P21453 382 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 GPTP24298 496 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 AVPR2P30518 371 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 GNL1P36915 607 aaPredicted RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 CASP5P51878 434 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 EEF1A1P68104 462 aaKnown RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 ENPP2Q13822 863 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 RPE65Q16518 533 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 TUBB8Q3ZCM7 444 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 FAM102BQ5T8I3 360 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 EEF1A1P5Q5VTE0 462 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 KHDRBS2Q5VWX1 349 aaKnown RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 FAM166AQ6J272 317 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 CHERPQ8IWX8 916 aaKnown RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 RNF113BQ8IZP6 322 aaKnown RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 Q8N7P7 452 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 KCNJ9Q92806 393 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 C18orf12Q96KH6 178 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 YME1L1Q96TA2 773 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 PKP2Q99959 881 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 UPF2Q9HAU5 1272 aaKnown RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 CYSLTR2Q9NS75 346 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 TM7SF3Q9NS93 570 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 TMEM181Q9P2C4 612 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 EXOGQ9Y2C4 368 aaKnown RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 MRPS28Q9Y2Q9 187 aaKnown RBP0.84□□□□□ -2.27
SENP6-212ENST00000503501 DISP3Q9P2K9 1392 aa0.84□□□□□ -2.27
SENP6-212ENST00000503501 IGLV5-45A0A087WSX0 123 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 CTAGE9A4FU28 777 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 HNRNPDLO14979 420 aaKnown RBP0.84□□□□□ -2.28
SENP6-212ENST00000503501 RASA4O43374 803 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 HNRNPRO43390 633 aaKnown RBP0.84□□□□□ -2.28
SENP6-212ENST00000503501 PI15O43692 258 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 ZFAND5O76080 213 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 IL1AP01583 271 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 CD48P09326 243 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 FRMD6-AS1P0C7T7 363 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 CTAGE8P0CG41 777 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 TFPIP10646 304 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 CD58P19256 250 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 CHATP28329 748 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 AKT1P31749 480 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 CAPRIN1Q14444 709 aaKnown RBP0.84□□□□□ -2.28
SENP6-212ENST00000503501 GBX1Q14549 363 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 NXNQ6DKJ4 435 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 FBXO38Q6PIJ6 1188 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 DOK6Q6PKX4 331 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 RBMS3Q6XE24 437 aaKnown RBP0.84□□□□□ -2.28
SENP6-212ENST00000503501 ASB18Q6ZVZ8 466 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 CTAGE4Q8IX94 777 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 TXLNBQ8N3L3 684 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 ZCRB1Q8TBF4 217 aaKnown RBP0.84□□□□□ -2.28
SENP6-212ENST00000503501 GRHL3Q8TE85 626 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 TMEM170AQ8WVE7 144 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 HMGB4Q8WW32 186 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 FCAMRQ8WWV6 532 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 ARRDC3Q96B67 414 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 AGAP3Q96P47 875 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 PIGSQ96S52 555 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 POLR3CQ9BUI4 534 aaPredicted RBP0.84□□□□□ -2.28
SENP6-212ENST00000503501 BRINP2Q9C0B6 783 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 CERS4Q9HA82 394 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 ATP8A2Q9NTI2 1148 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 ZIM2Q9NZV7 527 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 NDRG3Q9UGV2 375 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 ASIC3Q9UHC3 531 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 PADI1Q9ULC6 663 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP0.84□□□□□ -2.28
SENP6-212ENST00000503501 PCDHGB6Q9Y5F9 930 aa0.84□□□□□ -2.28
SENP6-212ENST00000503501 HMX3A6NHT5 357 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 EFCAB8A8MWE9 144 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 SLCO1B7G3V0H7 640 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 EBAG9O00559 213 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 SYNGR3O43761 229 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 MMP2P08253 660 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 LYL1P12980 280 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 STT3AP46977 705 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 CLCNKAP51800 687 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 BMXP51813 675 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 HDAC4P56524 1084 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 EIF4EBP2Q13542 120 aaPredicted RBP0.83□□□□□ -2.28
SENP6-212ENST00000503501 GTF2H2Q13888 395 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 RAB30Q15771 203 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 ME3Q16798 604 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 KRT24Q2M2I5 525 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 CTU2Q2VPK5 515 aaKnown RBP0.83□□□□□ -2.28
SENP6-212ENST00000503501 GLIPR1L2Q4G1C9 344 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 ZC2HC1CQ53FD0 456 aaPredicted RBP0.83□□□□□ -2.28
SENP6-212ENST00000503501 TECRLQ5HYJ1 363 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 GTF2H2CQ6P1K8 395 aa0.83□□□□□ -2.28
SENP6-212ENST00000503501 RINLQ6ZS11 566 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms