RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 GRIA1P42261 906 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 MAGEA6P43360 314 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 FNTBP49356 437 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 SARNPP82979 210 aaKnown RBP13.63□□□□□ -0.23
CPNE1-227ENST00000498056 CCDC15Q0P6D6 951 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 CDH17Q12864 832 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 MORF4L2Q15014 288 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 PTPRRQ15256 657 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 DENND2CQ68D51 928 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 DUPD1Q68J44 220 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 ZNF534Q76KX8 674 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 GLT6D1Q7Z4J2 308 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 HOOK3Q86VS8 718 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 NAT8LQ8N9F0 302 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 BBOF1Q8ND07 529 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 OR14C36Q8NHC7 312 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 WRAP53Q9BUR4 548 aaKnown RBP13.63□□□□□ -0.23
CPNE1-227ENST00000498056 NEUROG2Q9H2A3 272 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 EPB41L5Q9HCM4 733 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 GRHL1Q9NZI5 618 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 WHRNQ9P202 907 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 B4GALT6Q9UBX8 382 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 EBF1Q9UH73 591 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 DMGDHQ9UI17 866 aaKnown RBP13.63□□□□□ -0.23
CPNE1-227ENST00000498056 ANAPC5Q9UJX4 755 aa13.63□□□□□ -0.23
CPNE1-227ENST00000498056 C1orf232A0A0U1RR37 186 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 ANKRD66B4E2M5 251 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 SPINT1O43278 529 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 PLRG1O43660 514 aaKnown RBP13.62□□□□□ -0.23
CPNE1-227ENST00000498056 ZNF217O75362 1048 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 PCDH8O95206 1070 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 ELFN1P0C7U0 828 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 TIMP2P16035 220 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 TPH1P17752 444 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 IVDP26440 423 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 VIPR1P32241 457 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 SESN2P58004 480 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-227ENST00000498056 CDK16Q00536 496 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 ARHGEF7Q14155 803 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 HLTFQ14527 1009 aaKnown RBP eCLIP13.62□□□□□ -0.23
CPNE1-227ENST00000498056 POU6F1Q14863 301 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 HIBCHQ6NVY1 386 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-227ENST00000498056 DPPA4Q7L190 304 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 FAM160A2Q8N612 972 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-227ENST00000498056 HCAR2Q8TDS4 363 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 CXorf40AQ8TE69 158 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 RAB7BQ96AH8 199 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 SERPINB12Q96P63 405 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 MCCC1Q96RQ3 725 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-227ENST00000498056 C1QTNF1Q9BXJ1 281 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 BTBD1Q9H0C5 482 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 FAM114A2Q9NRY5 505 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 INVSQ9Y283 1065 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 SPO11Q9Y5K1 396 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 FADS3Q9Y5Q0 445 aa13.62□□□□□ -0.23
CPNE1-227ENST00000498056 IGHV1OR15-9A0A0B4J2B8 117 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 A0A0U1RQS6 177 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 CCDC78A2IDD5 438 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 GPR37L1O60883 481 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 SEMA4FO95754 770 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 EPOP01588 193 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 TDGF1P13385 188 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 LHCGRP22888 699 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 CD6P30203 668 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 ACSL1P33121 698 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 HNF1BP35680 557 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 SUOXP51687 545 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 TAS2R38P59533 333 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 RALGDSQ12967 914 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 ANGPT1Q15389 498 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 TRADDQ15628 312 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 HIF1AQ16665 826 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 LRRC66Q68CR7 880 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 DENND5AQ6IQ26 1287 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 RANBP10Q6VN20 620 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 MAMSTRQ6ZN01 415 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 LYSMD3Q7Z3D4 306 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 TSPAN33Q86UF1 283 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-227ENST00000498056 IFT81Q8WYA0 676 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 TOE1Q96GM8 510 aaKnown RBP13.61□□□□□ -0.23
CPNE1-227ENST00000498056 XAB2Q9HCS7 855 aaKnown RBP13.61□□□□□ -0.23
CPNE1-227ENST00000498056 CASS4Q9NQ75 786 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 FBXO4Q9UKT5 387 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 CUL9Q8IWT3 2517 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 RALGAPA1Q6GYQ0 2036 aa13.61□□□□□ -0.23
CPNE1-227ENST00000498056 LRRC72A6NJI9 287 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 SMAPO00193 183 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 AREL1O15033 823 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 AP1G1O43747 822 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 RNGTTO60942 597 aaKnown RBP13.6□□□□□ -0.23
CPNE1-227ENST00000498056 NDUFS2O75306 463 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 BANF1O75531 89 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 IGLV3-19P01714 112 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 C7P10643 843 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 MGAT1P26572 445 aa13.6□□□□□ -0.23
CPNE1-227ENST00000498056 OXTRP30559 389 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms