RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 GREB1Q4ZG55 1949 aa11.59□□□□□ -0.55
CDCA7-208ENST00000496441 FAM155AB1AL88 458 aaPredicted RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 RNASEH1O60930 286 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 IPO13O94829 963 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 ATP5BP06576 529 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 RHOQP17081 205 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 HOXC13P31276 330 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 ARL1P40616 181 aaPredicted RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 CCNHP51946 323 aaPredicted RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 SEMA3AQ14563 771 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 PFKFB4Q16877 469 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 IRGCQ6NXR0 463 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 CYP2R1Q6VVX0 501 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 DENND1CQ8IV53 801 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 CNTN4Q8IWV2 1026 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 EFHBQ8N7U6 833 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 BTN2A3PQ96KV6 586 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 KCNA7Q96RP8 456 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 TRIM8Q9BZR9 551 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 UPF3AQ9H1J1 476 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 VCXQ9H320 206 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 SMPD4Q9NXE4 827 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 CLIC5Q9NZA1 410 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 VWA8A3KMH1 1905 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 CCDC189A1A4V9 331 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 A6NHS1 94 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 CBX4O00257 560 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 SDHDO14521 159 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 ADAM12O43184 909 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 H2AFYO75367 372 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 OAZ2O95190 189 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 CDKN1CP49918 316 aaPredicted RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 TRIM71Q2Q1W2 868 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 TECRLQ5HYJ1 363 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 TMCO4Q5TGY1 634 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 NADSYN1Q6IA69 706 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 LINGO4Q6UY18 593 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 UMODL1-AS1Q8N2C9 162 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 PAF1Q8N7H5 531 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 RDH11Q8TC12 318 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 ANKRD27Q96NW4 1050 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 NSUN5Q96P11 429 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 SEMA6AQ9H2E6 1030 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 SARS2Q9NP81 518 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 STARD7Q9NQZ5 370 aa11.58□□□□□ -0.56
CDCA7-208ENST00000496441 TLR8Q9NR97 1041 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 GMPR2Q9P2T1 348 aaKnown RBP11.58□□□□□ -0.56
CDCA7-208ENST00000496441 CCDC162PA2VCL2 907 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 UBXN8O00124 270 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 UBFD1O14562 309 aaKnown RBP11.57□□□□□ -0.56
CDCA7-208ENST00000496441 DNAJA2O60884 412 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 GJB5O95377 273 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 SLC2A3P11169 496 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 FMO4P31512 558 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 DSC1Q08554 894 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
CDCA7-208ENST00000496441 CCSAPQ6IQ19 270 aaPredicted RBP11.57□□□□□ -0.56
CDCA7-208ENST00000496441 ARRDC2Q8TBH0 407 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 PTERQ96BW5 349 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 PRKD2Q9BZL6 878 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 KLHL4Q9C0H6 718 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 PRDM5Q9NQX1 630 aaPredicted RBP11.57□□□□□ -0.56
CDCA7-208ENST00000496441 PCDHGC4Q9Y5F7 938 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 MYO7AQ13402 2215 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 ARHGEF37A1IGU5 675 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 LDB2O43679 373 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 GLP2RO95838 553 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 S1PR4O95977 384 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 ALDH2P05091 517 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 FGFR3P22607 806 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 SLC6A4P31645 630 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 RGRP47804 291 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 INHBEP58166 350 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 ECT2LQ008S8 904 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 ZNF33AQ06730 810 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 NSUN2Q08J23 767 aaKnown RBP eCLIP11.57□□□□□ -0.56
CDCA7-208ENST00000496441 METTL21CQ5VZV1 264 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 SCIMPQ6UWF3 145 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 PIWIL4Q7Z3Z4 852 aaKnown RBP11.57□□□□□ -0.56
CDCA7-208ENST00000496441 DDIASQ8IXT1 998 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 CEP70Q8NHQ1 597 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 SCLYQ96I15 445 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 ZBTB26Q9HCK0 441 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 TMEM248Q9NWD8 314 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 UTP6Q9NYH9 597 aaKnown RBP11.57□□□□□ -0.56
CDCA7-208ENST00000496441 LRFN2Q9ULH4 789 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 BTRCQ9Y297 605 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 PCDHB7Q9Y5E2 793 aa11.57□□□□□ -0.56
CDCA7-208ENST00000496441 ZFP37Q9Y6Q3 630 aaPredicted RBP11.57□□□□□ -0.56
CDCA7-208ENST00000496441 A0A087X1B8 175 aa11.56□□□□□ -0.56
CDCA7-208ENST00000496441 MTMR11A4FU01 709 aa11.56□□□□□ -0.56
CDCA7-208ENST00000496441 UBDO15205 165 aa11.56□□□□□ -0.56
CDCA7-208ENST00000496441 CD3EAPO15446 510 aaKnown RBP11.56□□□□□ -0.56
CDCA7-208ENST00000496441 LYNP07948 512 aa11.56□□□□□ -0.56
CDCA7-208ENST00000496441 COL6A2P12110 1019 aa11.56□□□□□ -0.56
CDCA7-208ENST00000496441 GFAPP14136 432 aa11.56□□□□□ -0.56
CDCA7-208ENST00000496441 DNAJB2P25686 324 aa11.56□□□□□ -0.56
CDCA7-208ENST00000496441 SLC11A1P49279 550 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms